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See other HDAC5 GE Assays ›
Gene Symbol:
Hdac5
Gene Name:
histone deacetylase 5
Gene Aliases:
AI426555, Hdac4, mHDA1, mKIAA0600
Chromosome Location:
Chr.11: 102195747 - 102230186 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00515937_gH
Size
Availability Made To Order
Catalog # 4351372
Price 374.00
Your Price
Online offer:
374.0
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Hdac5
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001077696.1 NP_001071164.1 22 - 23 3167 60
NM_001284248.1 NP_001271177.1 24 - 25 3679 60
NM_001284249.1 NP_001271178.1 23 - 24 3276 60
NM_001284250.1 NP_001271179.1 22 - 23 3164 60
NM_010412.3 NP_034542.3 22 - 23 3164 60
GenBank mRNA AF006602.2 - 21 - 22 2877 60
AF207748.1 - 21 - 22 2796 60
AK122325.2 - 17 - 18 2206 60
AK139202.1 - 23 - 24 3250 60
AK145972.1 - 22 - 23 3130 60
AK146483.1 - 22 - 23 3103 60
AK155335.1 - 22 - 23 3138 60
AK161956.1 - 2 - 3 296 60
BC023309.1 - 13 - 14 1717 60
BC049926.1 - 22 - 23 3098 60
BC058554.1 - 24 - 25 3631 60
BC060609.1 - 21 - 22 2958 5720438 60

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1100003829.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Detect Genomic DNA Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hdac5

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
osteoblast development
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
protein deacetylation
inflammatory response
nervous system development
heart development
negative regulation of gene expression
regulation of myotube differentiation
negative regulation of myotube differentiation
chromatin modification
histone deacetylation
B cell differentiation
multicellular organismal response to stress
regulation of gene expression, epigenetic
B cell activation
response to cocaine
response to drug
regulation of protein binding
negative regulation of osteoblast differentiation
negative regulation of striated muscle tissue development
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of skeletal muscle fiber development
positive regulation of sequence-specific DNA binding transcription factor activity
regulation of striated muscle cell differentiation
renal tubule morphogenesis
cellular response to fluid shear stress
negative regulation of cell migration involved in sprouting angiogenesis
positive regulation of neural precursor cell proliferation
positive regulation of stem cell proliferation
RNA polymerase III transcription factor binding
core promoter sequence-specific DNA binding
core promoter binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription factor binding
chromatin binding
transcription corepressor activity
histone deacetylase activity
protein kinase C binding
protein binding
transcription factor binding
hydrolase activity
protein kinase binding
histone deacetylase activity (H3-K14 specific)
NAD-dependent histone deacetylase activity (H3-K14 specific)
histone deacetylase activity (H3-K9 specific)
protein deacetylase activity
histone deacetylase activity (H4-K16 specific)
histone deacetylase binding
transcription regulatory region DNA binding
metal ion binding
NAD-dependent histone deacetylase activity (H3-K9 specific)
NAD-dependent histone deacetylase activity (H4-K16 specific)
repressing transcription factor binding
NAD-dependent histone deacetylase activity (H3-K18 specific)

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1100035521.mm.1 NM_001077696.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035521.mm.1 NM_001077696.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035521.mm.1 NM_001284248.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035521.mm.1 NM_001284249.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035521.mm.1 NM_001284250.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035521.mm.1 NM_010412.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1100035521.mm.1 NM_010412.3 Refseq
Affymetrix Mouse Clariom S Array PSR1100035521.mm.1 TC1100003829.mm.1 MTA TC

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