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Gene Symbol:
Ctsd
Gene Name:
cathepsin D
Gene Aliases:
CD, CatD
Chromosome Location:
Chr.7: 142375916 - 142387870 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00515586_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Ctsd
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_009983.2 NP_034113.1 4 - 5 530 68
GenBank mRNA AK089294.1 - 4 - 5 488 68
AK150363.1 - 4 - 5 491 68
AK150364.1 - 4 - 5 488 68
AK150579.1 - 4 - 5 488 68
AK150622.1 - 4 - 5 488 68
AK150636.1 - 4 - 5 488 68
AK150694.1 - 4 - 5 488 68
AK150768.1 - 4 - 5 488 68
AK150946.1 - 4 - 5 540 68
AK151256.1 - 4 - 5 488 68
AK151275.1 - 4 - 5 488 68
AK151276.1 - 4 - 5 488 68
AK151374.1 - 4 - 5 488 68
AK151829.1 - 4 - 5 488 68
AK151962.1 - 4 - 5 491 68
AK152036.1 - 4 - 5 501 68
AK152045.1 - 4 - 5 541 68
AK152168.1 - 4 - 5 488 68
AK152187.1 - 4 - 5 488 68
AK152188.1 - 4 - 5 488 68
AK152406.1 - 4 - 5 491 68
AK152458.1 - 4 - 5 488 68
AK152567.1 - 4 - 5 488 68
AK152578.1 - 4 - 5 488 68
AK152593.1 - 4 - 5 518 68
AK152680.1 - 4 - 5 488 68
AK152828.1 - 4 - 5 488 68
AK152881.1 - 4 - 5 488 68
AK152892.1 - 4 - 5 488 68
AK153191.1 - 4 - 5 488 68
AK153291.1 - 4 - 5 488 68
AK159097.1 - 4 - 5 488 68
AK159209.1 - 4 - 5 488 68
AK159440.1 - 4 - 5 541 68
AK159490.1 - 4 - 5 488 68
AK159512.1 - 4 - 5 530 68
AK159580.1 - 4 - 5 488 68
AK159642.1 - 2 - 3 240 68
AK159743.1 - 4 - 5 492 68
AK159896.1 - 4 - 5 488 68
AK159970.1 - 4 - 5 541 68
AK165227.1 - 4 - 5 558 68
AK166864.1 - 4 - 5 501 68
AK166938.1 - 4 - 5 535 68
AK167143.1 - 4 - 5 526 68
AK167366.1 - 4 - 5 560 68
AK167698.1 - 4 - 5 487 68
AK167867.1 - 4 - 5 489 68
AK169139.1 - 4 - 5 541 68
AK171195.1 - 4 - 5 489 68
AK172583.1 - 4 - 5 488 68
AK194256.1 - 1 - 2 58 68
AK213259.1 - 1 - 2 58 68
AK213518.1 - 1 - 2 58 68
BC054758.1 - 4 - 5 560 6413315 68
BC057931.1 - 4 - 5 521 5253319 68
X52886.1 - 4 - 5 530 68
X53337.1 - 4 - 5 470 68

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700004565.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ctsd

Gene Ontology Categories:

Function(s) Process(es)

autophagosome assembly
proteolysis
autophagy
protein catabolic process
epithelial tube branching involved in lung morphogenesis
endopeptidase activity
aspartic-type endopeptidase activity
peptidase activity
hydrolase activity
peptide binding

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0700038487.mm.1 TC0700004565.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 925041 - -

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