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See other CTTN GE Assays ›
Gene Symbol:
Cttn
Gene Name:
cortactin
Gene Aliases:
1110020L01Rik, Ems1
Chromosome Location:
Chr.7: 144435723 - 144471004 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00514461_mH
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Cttn
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001252572.1 NP_001239501.1 5 - 6 633 64
NM_007803.5 NP_031829.2 5 - 6 633 64
GenBank mRNA AK084249.1 - 5 - 6 443 64
AK146856.1 - 5 - 6 440 64
AK148010.1 - 5 - 6 436 64
AK165555.1 - 5 - 6 436 64
AK168699.1 - 5 - 6 434 64
AK168871.1 - 5 - 6 434 64
AK168945.1 - 5 - 6 444 64
AK197295.1 - 1 - 2 38 64
BC011434.1 - 5 - 6 426 3981559 64
BC117820.1 - 4 - 5 334 64
U03184.1 - 5 - 6 422 64

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700004604.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cttn

Panther Classification:

Molecular Function -

actin or actin-binding cytoskeletal protein cytoskeletal protein non-motor actin binding protein

Gene Ontology Categories:

Function(s) Process(es)

intracellular protein transport
endocytosis
receptor-mediated endocytosis
substrate-dependent cell migration, cell extension
actin filament polymerization
regulation of axon extension
positive regulation of actin filament polymerization
actin cytoskeleton reorganization
positive regulation of smooth muscle contraction
focal adhesion assembly
neuron projection morphogenesis
cell motility
dendritic spine maintenance
lamellipodium organization
regulation of mitophagy
negative regulation of extrinsic apoptotic signaling pathway
protein binding
profilin binding
proline-rich region binding

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0700038968.mm.1 NM_001252572.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0700038968.mm.1 NM_001252572.1 Refseq
Affymetrix Mouse Clariom S Array PSR0700038968.mm.1 NM_007803.5.1 Refseq
Affymetrix Mouse Clariom S Array PSR0700038968.mm.1 NM_007803.5 Refseq
Affymetrix Mouse Clariom S Array PSR0700038968.mm.1 TC0700004604.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0700038971.mm.1 NM_001252572.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0700038971.mm.1 NM_001252572.1 Refseq
Affymetrix Mouse Clariom S Array PSR0700038971.mm.1 NM_007803.5.1 Refseq
Affymetrix Mouse Clariom S Array PSR0700038971.mm.1 NM_007803.5 Refseq
Affymetrix Mouse Clariom S Array PSR0700038971.mm.1 TC0700004604.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 475056 - -

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