Apex1
Genomic Map
Back To TopAssay Details
| Gene Symbol: Apex1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_009687.2 | NP_033817.1 | 2 - 3 | 195 | 115 | |
| GenBank mRNA | AK013296.1 | - | 2 - 3 | 163 | 115 | |
| BC052401.1 | - | 2 - 3 | 166 | 5715485 | 115 | |
| D90374.1 | - | 1 - 2 | 123 | 115 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC1400000573.mm.1Additional Information:
This assay is in the 5'UTR region of the AK013296.1,BC052401.1,D90374.1,NM_009687.2 transcripts.
Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
3' Most
Mammalian Gene Collection
Detect Genomic DNA
Mus musculus
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
DNA repair
base-excision repair
DNA recombination
transcription, DNA-templated
regulation of transcription, DNA-templated
cellular response to DNA damage stimulus
aging
negative regulation of smooth muscle cell migration
regulation of mRNA stability
cell redox homeostasis
positive regulation of DNA repair
oxidation-reduction process
cellular response to hydrogen peroxide
DNA demethylation
nucleic acid phosphodiester bond hydrolysis
RNA phosphodiester bond hydrolysis, endonucleolytic
positive regulation of G1/S transition of mitotic cell cycle
regulation of nucleic acid-templated transcription
DNA binding
damaged DNA binding
transcription coactivator activity
RNA binding
DNA-(apurinic or apyrimidinic site) lyase activity
nuclease activity
endonuclease activity
endoribonuclease activity
exonuclease activity
double-stranded DNA 3'-5' exodeoxyribonuclease activity
3'-5' exonuclease activity
oxidoreductase activity
hydrolase activity
lyase activity
site-specific endodeoxyribonuclease activity, specific for altered base
chromatin DNA binding
protein complex binding
phosphoric ester hydrolase activity
T/G mismatch-specific endonuclease activity
poly(A) RNA binding
retroviral 3' processing activity
metal ion binding
NF-kappaB binding
DNA repair
base-excision repair
DNA recombination
transcription, DNA-templated
regulation of transcription, DNA-templated
cellular response to DNA damage stimulus
aging
negative regulation of smooth muscle cell migration
regulation of mRNA stability
cell redox homeostasis
positive regulation of DNA repair
oxidation-reduction process
cellular response to hydrogen peroxide
DNA demethylation
nucleic acid phosphodiester bond hydrolysis
RNA phosphodiester bond hydrolysis, endonucleolytic
positive regulation of G1/S transition of mitotic cell cycle
regulation of nucleic acid-templated transcription
DNA binding
damaged DNA binding
transcription coactivator activity
RNA binding
DNA-(apurinic or apyrimidinic site) lyase activity
nuclease activity
endonuclease activity
endoribonuclease activity
exonuclease activity
double-stranded DNA 3'-5' exodeoxyribonuclease activity
3'-5' exonuclease activity
oxidoreductase activity
hydrolase activity
lyase activity
site-specific endodeoxyribonuclease activity, specific for altered base
chromatin DNA binding
protein complex binding
phosphoric ester hydrolase activity
T/G mismatch-specific endonuclease activity
poly(A) RNA binding
retroviral 3' processing activity
metal ion binding
NF-kappaB binding
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P29599145 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P29599143 | - | - |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 287175 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599150 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599156 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599151 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599146 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599157 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599154 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599144 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P08109676 | - | - |
| Whole Mouse Genome G4122A | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P135169 | - | - |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P132234 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P11399114 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P11399108 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P11399085 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P11399088 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P29599145 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P29599143 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599151 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599205 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599184 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599204 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599144 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599154 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599216 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599215 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599175 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599173 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599197 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599208 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599191 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599198 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599178 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599143 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599199 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599156 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599195 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599172 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599187 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599188 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599180 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599211 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599157 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599213 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599203 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599150 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599201 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599148 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599177 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599190 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599182 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599185 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P11399103 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599150 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599148 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599154 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599157 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599146 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599156 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P11399094 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P11399088 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P11399092 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10419543 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10414526 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10414524 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10414523 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10414525 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1437715_PM_x_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1456079_PM_x_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1416135_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10419542 | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10414522 | - | - |
| Mouse Genome 430 2.0 Array | 1456079_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1437715_PM_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1416135_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1456079_PM_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1416135_at | - | - |
| Mouse Genome 430 2.0 Array | 1437715_x_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 11792_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 11792_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR1400004484.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004484.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004484.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004482.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004482.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004482.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004486.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004486.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004486.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004489.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004489.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004489.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004485.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004485.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004485.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004487.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004487.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004487.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004483.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004483.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004483.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004488.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004488.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004488.mm.1 | TC1400000573.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1456079_PM_x_at | - | - |
| Mouse Expression Set 430 | 1456079_x_at | - | - |
| Mouse Expression Set 430 | 1416135_PM_at | - | - |
| Mouse Expression Set 430 | 1437715_x_at | - | - |
| Mouse Expression Set 430 | 1416135_at | - | - |
| Mouse Expression Set 430 | 1437715_PM_x_at | - | - |
| Murine Genome U74v2 Set | 93559_at | - | - |
| Murine Genome U74v2 Set | 93559_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1437715_PM_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1437715_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1416135_at | - | - |
| Mouse Genome 430A 2.0 Array | 1456079_PM_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1416135_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1456079_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1456079_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1456079_PM_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1416135_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1437715_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1437715_PM_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1416135_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 3190519 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 3190519 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0003190519 | - | - |
| mouse-6 v1.1 (Illumina) | scl46370.4_89-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 3190519 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl46370.4_89-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 3190519 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2918114 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2776952 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2776952 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2918114 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (3) | scl46370.4_89-S | - | - |
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