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See other TSR3 GE Assays ›
Gene Symbol:
Tsr3
Gene Name:
TSR3 20S rRNA accumulation
Gene Aliases:
0610007P22Rik, 1110014B11Rik, AL022759
Chromosome Location:
Chr.17: 25240170 - 25242799 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00503305_g1
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tsr3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001163718.1 NP_001157190.1 1 - 2 198 118
NM_026676.3 NP_080952.2 1 - 2 198 118
GenBank mRNA AK002309.1 - 1 - 2 170 118
AK158743.1 - 1 - 2 199 118
AK169072.1 - 1 - 2 133 118
AK170074.1 - 1 - 2 167 118
BC027751.1 - 1 - 2 203 5011894 118
BC089019.1 - 1 - 2 147 30551363 118
CA979987.1 - 1 - 2 147 118

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700000367.mm.1

Additional Information:

This assay is in the 5'UTR region of the BC027751.1 transcripts.

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Mus musculus 1700 Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tsr3

Gene Ontology Categories:

Function(s) Process(es)

rRNA processing
biological_process
maturation of SSU-rRNA
ribosome biogenesis
molecular_function

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1700003044.mm.1 NM_001163718.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700003044.mm.1 NM_001163718.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700003044.mm.1 NM_026676.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700003044.mm.1 NM_026676.3 Refseq
Affymetrix Mouse Clariom S Array PSR1700003044.mm.1 TC1700000367.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1700003048.mm.1 TC1700000367.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1700003041.mm.1 NM_001163718.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700003041.mm.1 NM_001163718.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700003041.mm.1 NM_026676.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700003041.mm.1 NM_026676.3 Refseq
Affymetrix Mouse Clariom S Array PSR1700003041.mm.1 TC1700000367.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1700003043.mm.1 NM_001163718.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700003043.mm.1 NM_001163718.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700003043.mm.1 NM_026676.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1700003043.mm.1 NM_026676.3 Refseq
Affymetrix Mouse Clariom S Array PSR1700003043.mm.1 TC1700000367.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 580017 - -

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