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Gene Symbol:
Pgd
Gene Name:
phosphogluconate dehydrogenase
Gene Aliases:
0610042A05Rik, AU019875, C78335
Chromosome Location:
Chr.4: 149149985 - 149166707 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00503029_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Pgd
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001081274.1 NP_001074743.1 1 - 2 121 65
GenBank mRNA AK002894.1 - 1 - 2 83 65
AK077110.1 - 1 - 2 83 65
AK150210.1 - 1 - 2 84 65
AK150490.1 - 1 - 2 80 65
AK151380.1 - 1 - 2 80 65
AK151993.1 - 1 - 2 80 65
AK152758.1 - 1 - 2 80 65
AK152894.1 - 1 - 2 80 65
AK153409.1 - 1 - 2 77 65
AK155027.1 - 1 - 2 80 65
AK161869.1 - 1 - 2 79 65
AK166733.1 - 1 - 2 75 65
AK166947.1 - 1 - 2 57 65
AK167215.1 - 1 - 2 75 65
AK168251.1 - 1 - 2 80 65
BC008646.1 - 1 - 2 52 3155147 65
BC011329.1 - 1 - 2 70 3984654 65
BC014793.1 - 1 - 2 89 3155100 65

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400004034.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK002894.1,AK150210.1,AK150490.1,AK151380.1,AK151993.1,AK152758.1,AK152894.1,AK153409.1,AK155027.1,AK166733.1,AK166947.1,AK167215.1,AK168251.1,BC008646.1,BC011329.1,BC014793.1,NM_001081274.1 transcripts.

Set Membership:

Amplicon length less than or equal to 70 Mammalian Gene Collection Detect Genomic DNA Mus musculus 1700 Probe spans exons

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Function(s) Process(es)

carbohydrate metabolic process
pentose-phosphate shunt
NADP metabolic process
pentose-phosphate shunt, oxidative branch
pentose biosynthetic process
D-gluconate metabolic process
oxidation-reduction process
phosphogluconate dehydrogenase (decarboxylating) activity
phosphogluconate 2-dehydrogenase activity
oxidoreductase activity
carbohydrate binding
carboxylic acid binding
NADP binding

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0400033431.mm.1 NM_001081274.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033431.mm.1 NM_001081274.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033431.mm.1 TC0400004034.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0400033427.mm.1 NM_001081274.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033427.mm.1 NM_001081274.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033427.mm.1 TC0400004034.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR0400033426.mm.1 NM_001081274.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033426.mm.1 NM_001081274.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400033426.mm.1 TC0400004034.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 908720 - -

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