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See other TDG GE Assays ›
Gene Symbol:
Tdg Gm9855
Gene Name:
thymine DNA glycosylase
thymine DNA glycosylase pseudogene
Gene Aliases:
E130317C12Rik, JZA-3, Jza1
ENSMUSG00000051559
Chromosome Location:
Chr.10: 82629247 - 82650494 on Build GRCm38
Chromosome Location:
Chr.10: 42052558 - 42055453 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
-
Assay ID Mm00495576_g1
Size
Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Tdg
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_011561.2 NP_035691.2 3 - 4 519 80
NM_172552.3 NP_766140.2 3 - 4 618 80
GenBank mRNA AF102875.1 - 1 - 2 191 80
AK053870.1 - 3 - 4 546 80
AK164090.1 - 3 - 4 479 80
AK164643.1 - 3 - 4 586 80
AK169768.1 - 3 - 4 542 80
BC010315.1 - 3 - 4 508 3595866 80
BC085470.1 - 3 - 4 565 6416434 80
BC085471.1 - 3 - 4 589 6816716 80
Gene Symbol: Gm9855
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_037190.1 1 515 80
GenBank mRNA AF069519.1 - 1 476 80
AK089915.1 - 1 519 80

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1000000928.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tdg
Click here to find siRNAs for Gene Gm9855

Panther Classification:

Molecular Function -

DNA metabolism protein DNA glycosylase nucleic acid metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA repair
base-excision repair
mismatch repair
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
cellular response to DNA damage stimulus
metabolic process
embryo development
chromatin modification
negative regulation of protein binding
negative regulation of chromatin binding
regulation of gene expression, epigenetic
DNA demethylation
RNA polymerase II transcription cofactor activity
double-stranded DNA binding
protein kinase C binding
protein binding
transcription factor binding
pyrimidine-specific mismatch base pair DNA N-glycosylase activity
hydrolase activity
hydrolase activity, acting on glycosyl bonds
hydrolase activity, hydrolyzing N-glycosyl compounds
DNA N-glycosylase activity
protein domain specific binding
mismatched DNA binding
SUMO binding
protein homodimerization activity
structure-specific DNA binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1000007386.mm.1 NM_011561.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007386.mm.1 NM_011561.2 Refseq
Affymetrix Mouse Clariom S Array PSR1000007386.mm.1 NM_172552.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007386.mm.1 NM_172552.3 Refseq
Affymetrix Mouse Clariom S Array PSR1000007386.mm.1 NR_037190.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007386.mm.1 TC1000000928.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1000007388.mm.1 NM_011561.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007388.mm.1 NM_011561.2 Refseq
Affymetrix Mouse Clariom S Array PSR1000007388.mm.1 NM_172552.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007388.mm.1 NM_172552.3 Refseq
Affymetrix Mouse Clariom S Array PSR1000007388.mm.1 NR_037190.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007388.mm.1 TC1000000928.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1000007389.mm.1 NM_011561.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007389.mm.1 NM_011561.2 Refseq
Affymetrix Mouse Clariom S Array PSR1000007389.mm.1 NM_172552.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007389.mm.1 NM_172552.3 Refseq
Affymetrix Mouse Clariom S Array PSR1000007389.mm.1 NR_037190.1 Refseq
Affymetrix Mouse Clariom S Array PSR1000007389.mm.1 TC1000000928.mm.1 MTA TC

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