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See other SMPD1 GE Assays ›
Gene Symbol:
Smpd1
Gene Name:
sphingomyelin phosphodiesterase 1, acid lysosomal
Gene Aliases:
A-SMase, ASM, Zn-SMase, aSMase
Chromosome Location:
Chr.7: 105554360 - 105558389 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00488319_g1
Size
Availability Inventoried
Catalog # 4331182
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Smpd1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_011421.2 NP_035551.1 3 - 4 1416 71
GenBank mRNA AK088147.1 - 3 - 4 1385 71
AK145534.1 - 3 - 4 1385 71
AK145702.1 - 3 - 4 1417 71
AK148189.1 - 3 - 4 1390 71
AK149579.1 - 3 - 4 1385 71
AK164167.1 - 3 - 4 1385 71
AK164717.1 - 3 - 4 1340 71
AK167802.1 - 3 - 4 1339 71
AK191140.1 - 1 - 2 125 71
AK191382.1 - 1 - 2 125 71
AK192380.1 - 1 - 2 125 71
AK195024.1 - 1 - 2 125 71
AK199356.1 - 1 - 2 71
AK199702.1 - 1 - 2 125 71
AK202084.1 - 162 71
AK202792.1 - 125 71
AK203823.1 - 1 - 2 125 71
AK205083.1 - 1 - 2 125 71
AK216301.1 - 1 - 2 93 71
AK218218.1 - 1 - 2 125 71
BC011304.1 - 3 - 4 1351 3964394 71
BC034515.1 - 3 - 4 1341 4482098 71
Z14252.1 - 3 - 4 1362 71

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700001554.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Mus musculus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smpd1

Panther Classification:

Molecular Function -

hydrolase phosphodiesterase metabolite interconversion enzyme

Gene Ontology Categories:

Function(s) Process(es)

sphingomyelin catabolic process
metabolic process
termination of signal transduction
positive regulation of protein dephosphorylation
response to cocaine
positive regulation of apoptotic process
negative regulation of MAP kinase activity
ceramide biosynthetic process
sphingomyelin phosphodiesterase activity
hydrolase activity
hydrolase activity, acting on glycosyl bonds

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0700012981.mm.1 NM_011421.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0700012981.mm.1 NM_011421.2 Refseq
Affymetrix Mouse Clariom S Array PSR0700012981.mm.1 TC0700001554.mm.1 MTA TC

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