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See other SIN3A GE Assays ›
Gene Symbol:
Sin3a
Gene Name:
transcriptional regulator, SIN3A (yeast)
Gene Aliases:
AW553200, Sin3, mKIAA4126, mSin3A
Chromosome Location:
Chr.9: 57071991 - 57128368 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00488243_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Sin3a
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001110350.1 NP_001103820.1 7 - 8 1448 91
NM_001110351.1 NP_001103821.1 8 - 9 1325 91
NM_011378.2 NP_035508.2 8 - 9 1556 91
GenBank mRNA AK032209.1 - 7 - 8 1316 91
AK136347.1 - 2 - 3 250 91
AK220292.1 - 7 - 8 1425 91
BC052716.1 - 7 - 8 1335 6837144 91
BC053385.1 - 7 - 8 1318 91
BC078454.1 - 7 - 8 1309 91
L36831.1 - 7 - 8 1239 91
L38620.2 - 6 - 7 1215 91
L38621.2 - 6 - 7 1215 91
U22394.1 - 8 - 9 1564 91

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0900000695.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Detect Genomic DNA Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sin3a

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
in utero embryonic development
activation of innate immune response
positive regulation of defense response to virus by host
hematopoietic progenitor cell differentiation
DNA replication
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
protein deacetylation
aging
response to organonitrogen compound
regulation of hormone levels
positive regulation of G2/M transition of mitotic cell cycle
histone deacetylation
positive regulation of chromatin silencing
cellular protein localization
negative regulation of circadian rhythm
negative regulation of apoptotic process
regulation of transcription from RNA polymerase II promoter in response to oxidative stress
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
rhythmic process
response to methylglyoxal
cellular response to glucose stimulus
negative regulation of protein localization to nucleus
negative regulation of histone H3-K27 acetylation
negative regulation of transcription regulatory region DNA binding
transcription regulatory region sequence-specific DNA binding
RNA polymerase II activating transcription factor binding
RNA polymerase II repressing transcription factor binding
RNA polymerase II transcription corepressor activity
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
transcription corepressor activity
RNA binding
histone deacetylase activity
protein binding
transcription factor binding
protein complex binding
protein deacetylase activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0900005038.mm.1 NM_001110350.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0900005038.mm.1 NM_001110350.1 Refseq
Affymetrix Mouse Clariom S Array PSR0900005038.mm.1 NM_001110351.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0900005038.mm.1 NM_001110351.1 Refseq
Affymetrix Mouse Clariom S Array PSR0900005038.mm.1 NM_011378.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0900005038.mm.1 NM_011378.2 Refseq
Affymetrix Mouse Clariom S Array PSR0900005038.mm.1 TC0900000695.mm.1 MTA TC

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