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See other RPGR GE Assays ›
Gene Symbol:
Rpgr
Gene Name:
retinitis pigmentosa GTPase regulator
Gene Aliases:
Rp3h
Chromosome Location:
Chr.X: 10158216 - 10216795 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00488055_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Rpgr
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001177950.1 NP_001171421.1 3 - 4 465 66
NM_001177951.1 NP_001171422.1 3 - 4 465 66
NM_001177952.1 NP_001171423.1 3 - 4 459 66
NM_001177953.1 NP_001171424.1 3 - 4 465 66
NM_001177954.1 NP_001171425.1 3 - 4 465 66
NM_011285.2 NP_035415.1 3 - 4 465 66
GenBank mRNA AF044677.1 - 3 - 4 383 66
AJ238396.1 - 3 - 4 377 66
AK017192.1 - 3 - 4 397 66
AK029864.1 - 3 - 4 591 66
AK038652.1 - 3 - 4 429 66
AK081631.1 - 3 - 4 404 66
AK136298.1 - 3 - 4 396 66
AK138977.1 - 3 - 4 460 66
BC012661.1 - 3 - 4 404 66

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00003418.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rpgr

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)

visual perception
cell projection organization
intraciliary transport
cilium assembly
eye photoreceptor cell development
response to stimulus
retina morphogenesis in camera-type eye
cellular response to light stimulus
guanyl-nucleotide exchange factor activity
protein binding
poly(A) RNA binding

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_001177950.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_001177950.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_001177951.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_001177951.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_001177952.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_001177952.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_001177953.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_001177953.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_001177954.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_001177954.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_011285.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 NM_011285.2 Refseq
Affymetrix Mouse Clariom S Array PSR0X00011796.mm.1 TC0X00003418.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 608106 - -

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