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See other NFKB1 GE Assays ›
Gene Symbol:
Nfkb1
Gene Name:
nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
Gene Aliases:
NF-KB1, NF-kappaB, NF-kappaB1, p105, p50, p50/p105
Chromosome Location:
Chr.3: 135584655 - 135691547 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00476361_m1
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Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information
  • Citations (1)

Genomic Map

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Assay Details

Gene Symbol: Nfkb1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_008689.2 NP_032715.2 6 - 7 753 70
GenBank mRNA AB119195.1 - 4 - 5 251 70
AB221614.1 - 4 - 5 258 70
AK052726.1 - 1 - 2 61 70
AY423849.1 - 1 - 2 92 70
AY521462.1 - 4 - 5 251 70
AY521463.1 - 4 - 5 251 70
BC050841.1 - 6 - 7 753 70
BC138535.1 - 5 - 6 330 8861555 70
BC138536.1 - 5 - 6 330 8861556 70
M57999.1 - 6 - 7 542 70

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300002994.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK052726.1 transcripts.

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Apoptosis Mammalian Gene Collection Recommended Assay Mus musculus Mouse Chemokine Panel Mouse Estrogen Panel Mouse Immune Response 1700 Inventoried Mouse_Immune_Response Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nfkb1

Panther Classification:

Molecular Function -

Rel homology transcription factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
negative regulation of cytokine production
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
apoptotic process
inflammatory response
response to oxidative stress
signal transduction
I-kappaB kinase/NF-kappaB signaling
negative regulation of calcidiol 1-monooxygenase activity
response to cytokine
response to muscle stretch
NIK/NF-kappaB signaling
negative regulation of apoptotic process
negative regulation of interleukin-12 biosynthetic process
innate immune response
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
lymph node development
negative regulation of inflammatory response
cellular response to lipopolysaccharide
cellular response to nicotine
cellular response to interleukin-6
cellular response to dsRNA
cellular response to peptide hormone stimulus
positive regulation of canonical Wnt signaling pathway
positive regulation of hyaluronan biosynthetic process
positive regulation of miRNA metabolic process
regulatory region DNA binding
transcription regulatory region sequence-specific DNA binding
RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
chromatin binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
heat shock protein binding
identical protein binding
protein homodimerization activity
sequence-specific DNA binding
transcription regulatory region DNA binding
protein heterodimerization activity

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0300023642.mm.1 NM_008689.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0300023642.mm.1 NM_008689.2 Refseq
Affymetrix Mouse Clariom S Array PSR0300023642.mm.1 TC0300002994.mm.1 MTA TC
Array Name Probe IDs Targets Target Type
ABI Mouse Genome Survey Microarray 914937 - -

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Citations (1)

Regulation of nuclear factor kappaB in the hippocampus by group I metabotropic glutamate receptors.
Authors
O'Riordan KJ, Huang IC, Pizzi M, Spano P, Boroni F, Egli R, Desai P, Fitch O, Malone L, Ahn HJ, Liou HC, Sweatt JD, Levenson JM
Journal
J Neurosci - Page No 4870 (Wed May 03 00:00:00 UTC 2006)
Volume (Year)
26 (2006)
Product Usage
-

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