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See other PRPF19 GE Assays ›
Gene Symbol:
Prpf19
Gene Name:
PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)
Gene Aliases:
AA617263, AL024362, D19Wsu55e, NMP200, PSO4, Prp19, Snev
Chromosome Location:
Chr.19: 10895231 - 10909559 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00467286_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Prpf19
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001253843.1 NP_001240772.1 2 - 3 394 87
NM_134129.4 NP_598890.1 2 - 3 394 87
GenBank mRNA AB222602.1 - 2 - 3 179 87
AF251503.1 - 2 - 3 359 87
AK047693.1 - 2 - 3 212 87
AK088769.1 - 2 - 3 379 87
AK164681.1 - 2 - 3 382 87
BC004070.1 - 2 - 3 333 3591050 87

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900000212.mm.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Detect Genomic DNA Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prpf19

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Function(s) Process(es)

protein polyubiquitination
spliceosomal tri-snRNP complex assembly
spliceosomal complex assembly
generation of catalytic spliceosome for first transesterification step
mRNA splicing, via spliceosome
inner cell mass cell proliferation
DNA repair
double-strand break repair via nonhomologous end joining
mRNA processing
cellular response to DNA damage stimulus
RNA splicing
lipid biosynthetic process
proteasomal protein catabolic process
protein ubiquitination
cellular protein localization
negative regulation of neuron differentiation
positive regulation of neuron differentiation
positive regulation of mRNA splicing, via spliceosome
positive regulation of astrocyte differentiation
protein K63-linked ubiquitination
signal transduction involved in DNA damage checkpoint
ubiquitin-protein transferase activity
protein binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
ubiquitin-ubiquitin ligase activity
identical protein binding
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
ubiquitin protein ligase activity
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1900002663.mm.1 NM_001253843.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1900002663.mm.1 NM_001253843.1 Refseq
Affymetrix Mouse Clariom S Array PSR1900002663.mm.1 TC1900000212.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1900002661.mm.1 NM_001253843.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR1900002661.mm.1 NM_001253843.1 Refseq
Affymetrix Mouse Clariom S Array PSR1900002661.mm.1 NM_134129.4.1 Refseq
Affymetrix Mouse Clariom S Array PSR1900002661.mm.1 NM_134129.4 Refseq
Affymetrix Mouse Clariom S Array PSR1900002661.mm.1 TC1900000212.mm.1 MTA TC

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