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See other NFX1 GE Assays ›
Gene Symbol:
Nfx1
Gene Name:
nuclear transcription factor, X-box binding 1
Gene Aliases:
1300017N15Rik, 3000003M19Rik, NFX.1, TEG-42, Tex42
Chromosome Location:
Chr.4: 40970644 - 41025992 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00458385_m1
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Nfx1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001290448.1 NP_001277377.1 3 - 4 1304 57
NM_001290449.1 NP_001277378.1 3 - 4 1304 57
NM_023739.3 NP_076228.2 3 - 4 1267 57
GenBank mRNA AF223576.1 - 3 - 4 1231 57
AK005038.2 - 3 - 4 1239 57
AK033850.1 - 3 - 4 1198 57
AK050749.1 - 3 - 4 1241 57
AK144647.1 - 3 - 4 1253 57
AK146108.1 - 3 - 4 1221 57
AK155387.1 - 3 - 4 1219 57
AK160013.1 - 3 - 4 1237 57
BC053709.1 - 3 - 4 1202 30052746 57

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400000354.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nfx1

Panther Classification:

Molecular Function -

zinc finger transcription factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
negative regulation of MHC class II biosynthetic process
RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
nucleic acid binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
poly(A) RNA binding
metal ion binding
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0400002197.mm.1 NM_023739.3.1 Refseq
Affymetrix Mouse Clariom S Array PSR0400002197.mm.1 NM_023739.3 Refseq
Affymetrix Mouse Clariom S Array PSR0400002197.mm.1 TC0400000354.mm.1 MTA TC

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