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See other CD40 GE Assays ›
Gene Symbol:
Cd40
Gene Name:
CD40 antigen
Gene Aliases:
AI326936, Bp50, GP39, HIGM1, IGM, IMD3, T-BAM, TRAP, Tnfrsf5, p50
Chromosome Location:
Chr.2: 165055604 - 165071654 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00441894_g1
Size
Availability Inventoried
Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Cd40
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_011611.2 NP_035741.2 4 - 5 474 65
NM_170702.2 NP_733803.2 4 - 5 474 65
NM_170703.2 NP_733804.1 4 - 5 474 65
NM_170704.2 NP_733805.1 4 - 5 474 65
NR_027852.1 4 - 5 474 65
GenBank mRNA AJ401387.1 - 4 - 5 408 65
AJ401388.1 - 4 - 5 408 65
AJ401389.1 - 4 - 5 408 65
AJ401390.1 - 4 - 5 408 65
AK089861.1 - 427 65
AK150959.1 - 4 - 5 431 65
AK151458.1 - 4 - 5 431 65
AK152716.1 - 4 - 5 432 65
AK152756.1 - 4 - 5 430 65
AK152942.1 - 4 - 5 438 65
AK156644.1 - 4 - 5 442 65
AK161978.1 - 4 - 5 431 65
AK162305.1 - 4 - 5 484 65
BC029254.1 - 4 - 5 432 4018221 65
BY743050.1 - 4 - 5 430 65
CT010343.1 - 4 - 5 402 65
M83312.1 - 4 - 5 410 65

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200002544.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Detect Genomic DNA Mus musculus Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cd40

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Function(s) Process(es)

positive regulation of protein phosphorylation
immune system process
immune response-regulating cell surface receptor signaling pathway
cellular calcium ion homeostasis
inflammatory response
positive regulation of B cell proliferation
positive regulation of interleukin-12 production
B cell activation
positive regulation of tyrosine phosphorylation of Stat1 protein
defense response to protozoan
positive regulation of MAP kinase activity
protein kinase B signaling
positive regulation of GTPase activity
positive regulation of transcription from RNA polymerase II promoter
positive regulation of isotype switching to IgG isotypes
regulation of immune response
regulation of immunoglobulin secretion
positive regulation of NF-kappaB transcription factor activity
defense response to virus
positive regulation of protein kinase C signaling
positive regulation of endothelial cell apoptotic process
antigen binding
protein binding
enzyme binding
ubiquitin protein ligase binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 NM_011611.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 NM_011611.2 Refseq
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 NM_170702.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 NM_170702.2 Refseq
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 NM_170703.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 NM_170703.2 Refseq
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 NM_170704.2.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 NM_170704.2 Refseq
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 NR_027852.1.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 NR_027852.1 Refseq
Affymetrix Mouse Clariom S Array PSR0200020905.mm.1 TC0200002544.mm.1 MTA TC

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