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See other DNMT3A GE Assays ›
Gene Symbol:
Dnmt3a
Gene Name:
DNA methyltransferase 3A
Gene Aliases:
MmuIIIA
Chromosome Location:
Chr.12: 3804535 - 3914443 on Build GRCm38
Species:
Mouse
Species Specific ID (Flybase ID):
-
Assay ID Mm00432871_g1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: Dnmt3a
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001271753.1 NP_001258682.1 7 - 8 1112 61
NM_007872.4 NP_031898.1 7 - 8 1158 61
NM_153743.4 NP_714965.1 2 - 3 336 61
GenBank mRNA AF068625.2 - 7 - 8 1062 61
AF480164.1 - 2 - 3 336 61
AK077792.1 - 2 - 3 301 61
AK090132.1 - 7 - 8 1089 61
AK136170.1 - 2 - 3 258 61
AK147263.1 - 7 - 8 1112 61
AK147627.1 - 7 - 8 1112 61
AK147642.1 - 7 - 8 1112 61
AK147676.1 - 7 - 8 1087 61
AK157792.1 - 2 - 3 307 61
BC007466.1 - 7 - 8 1090 3492853 61
BE855330.1 - 2 - 3 336 61

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200000016.mm.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Detect Genomic DNA Mus musculus Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Dnmt3a

Panther Classification:

Molecular Function -

DNA methyltransferase

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA methylation
methylation-dependent chromatin silencing
regulation of gene expression by genetic imprinting
transcription, DNA-templated
regulation of transcription, DNA-templated
spermatogenesis
maintenance of DNA methylation
DNA methylation on cytosine within a CG sequence
positive regulation of cell death
chromatin modification
methylation
DNA methylation on cytosine
DNA methylation involved in embryo development
DNA methylation involved in gamete generation
hypermethylation of CpG island
S-adenosylhomocysteine metabolic process
S-adenosylmethioninamine metabolic process
cellular response to amino acid stimulus
C-5 methylation of cytosine
DNA binding
chromatin binding
DNA (cytosine-5-)-methyltransferase activity
protein binding
methyltransferase activity
transferase activity
identical protein binding
unmethylated CpG binding
metal ion binding
DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Mouse Clariom S Array PSR1200000223.mm.1 NM_001271753.1 Refseq
Affymetrix Mouse Clariom S Array PSR1200000223.mm.1 NM_007872.4.1 Refseq
Affymetrix Mouse Clariom S Array PSR1200000223.mm.1 NM_007872.4 Refseq
Affymetrix Mouse Clariom S Array PSR1200000223.mm.1 NM_153743.4 Refseq
Affymetrix Mouse Clariom S Array PSR1200000223.mm.1 TC1200000016.mm.1 MTA TC
Affymetrix Mouse Clariom S Array PSR1200000224.mm.1 NM_001271753.1 Refseq
Affymetrix Mouse Clariom S Array PSR1200000224.mm.1 NM_007872.4.1 Refseq
Affymetrix Mouse Clariom S Array PSR1200000224.mm.1 NM_007872.4 Refseq
Affymetrix Mouse Clariom S Array PSR1200000224.mm.1 NM_153743.4 Refseq
Affymetrix Mouse Clariom S Array PSR1200000224.mm.1 TC1200000016.mm.1 MTA TC

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