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See other SETMAR GE Assays ›
Gene Symbol:
SETMAR
Gene Name:
SET domain and mariner transposase fusion gene
Gene Aliases:
METNASE, Mar1
Chromosome Location:
Chr.3: 4303304 - 4320649 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs07287848_m1
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: SETMAR
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001243723.1 NP_001230652.1 3 - 4 669 99
NM_001320676.1 NP_001307605.1 2 - 3 337 99
NM_001320677.1 NP_001307606.1 3 - 4 649 99
NM_006515.3 NP_006506.3 2 - 3 1086 99
XM_006713292.3 XP_006713355.1 2 - 3 422 99
XM_006713294.3 XP_006713357.1 3 - 4 711 99
XM_017007032.1 XP_016862521.1 2 - 3 1149 99
GenBank mRNA AF054989.1 - 2 - 3 1012 99
AK222734.1 - 2 - 3 1022 99
AK297865.1 - 3 - 4 584 99
AK302296.1 - 3 - 4 603 99
AK307537.1 - 2 - 3 1086 99
AY952295.1 - 2 - 3 991 99
BC008931.2 - 2 - 3 256 99
U80776.1 - 2 - 3 1003 99

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More Information


Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 3' Most Mammalian Gene Collection Recommended Assay Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SETMAR

Panther Classification:

Molecular Function -

viral or transposable element protein

Gene Ontology Categories:

Function(s) Process(es)

DNA double-strand break processing
DNA catabolic process, endonucleolytic
double-strand break repair via nonhomologous end joining
cell proliferation
histone H3-K36 methylation
DNA integration
replication fork processing
mitotic DNA integrity checkpoint
histone H3-K4 methylation
negative regulation of cell cycle arrest
nucleic acid phosphodiester bond hydrolysis
histone H3-K36 dimethylation
positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
positive regulation of double-strand break repair via nonhomologous end joining
negative regulation of chromosome organization
single-stranded DNA endodeoxyribonuclease activity
double-stranded DNA binding
single-stranded DNA binding
endonuclease activity
protein binding
zinc ion binding
histone methyltransferase activity (H3-K4 specific)
protein homodimerization activity
structure-specific DNA binding
DNA topoisomerase binding
histone methyltransferase activity (H3-K36 specific)

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