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See other TRIM56 GE Assays ›
Gene Symbol:
TRIM56 C11orf72 FKSG49 HELLPAR LOC100506634 NEK5 SLC38A9 TDRKH
Gene Name:
tripartite motif containing 56
chromosome 11 open reading frame 72
FKSG49
HELLP associated long non-coding RNA
hepatocellular carcinoma-associated antigen HCA25a
NIMA related kinase 5
solute carrier family 38 member 9
tudor and KH domain containing
Gene Aliases:
RNF109
-
FKSG52, FKSG55, FKSG56, FKSG57, FKSG60, FKSG61, FKSG64, FKSG65, FKSG66, FKSG67, FKSG68, FKSG70
LINC-HELLP, lncHELLP
-
-
URLC11
TDRD2
Chromosome Location:
Chr.7: 101085424 - 101097967 on Build GRCh38
Chromosome Location:
Chr.11: 67602880 - 67606706 on Build GRCh38
Chromosome Location:
-
Chromosome Location:
-
Chromosome Location:
Chr.19: 58403223 - 58408466 on Build GRCh38
Chromosome Location:
Chr.13: 52064762 - 52129092 on Build GRCh38
Chromosome Location:
Chr.5: 55625845 - 55712344 on Build GRCh38
Chromosome Location:
Chr.1: 151769354 - 151790576 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
-
-
-
-
-
-
-
Assay ID Hs05359852_g1
Size
Availability Made To Order
Catalog # 4351372
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: TRIM56
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq XM_011516589.2 XP_011514891.1 2 5962 78
Gene Symbol: C11orf72
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_130935.1 3 1210 78
Gene Symbol: FKSG49
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
GenBank mRNA AF336882.1 - 1 78
AF336883.1 - 1 78
AF338190.1 - 1 78
AF338193.1 - 1 78
AF338194.1 - 1 78
AF338195.1 - 1 78
AF469044.1 - 1 78
Gene Symbol: HELLPAR
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
GenBank mRNA JX088243.1 - 1 78
Gene Symbol: LOC100506634
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
GenBank mRNA AF469043.1 - 2 2656 78
Gene Symbol: NEK5
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
GenBank mRNA AK126330.1 - 9 78
Gene Symbol: SLC38A9
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
GenBank mRNA AK128743.1 - 2929 78
Gene Symbol: TDRKH
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
GenBank mRNA AK225160.1 - 15 3492 78
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AK096805.1 - 1 1317 Chr. 20 - 35262214 - 35264187 [-] on Build GRCh38 78
GenBankmRNA BC034305.1 - 2 1363 Chr. 20 - 17778326 - 17780095 [+] on Build GRCh38 78
GenBankmRNA AK098742.1 - Chr. - - [-] on Build 78
GenBankmRNA AK056289.1 - 5 1778 Chr. 7 - 68047970 - 68084254 [+] on Build GRCh38 78

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More Information


Additional Information:

This assay is in the 5'UTR region of the AF336882.1, AF336883.1, AF338190.1, AF338193.1, AF338194.1, AF338195.1, AF469044.1 transcripts.

Set Membership:

Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Detect Genomic DNA Homo sapiens Both primers and probe map within a single exon

Gene Ontology Categories:

Function(s) Process(es)

regulation of type I interferon production
interferon-beta production
response to type I interferon
defense response to virus
protein K63-linked ubiquitination
ubiquitin-protein transferase activity
zinc ion binding
ligase activity
poly(A) RNA binding

MicroArray Probes:

Agilent

Array Name Probe IDs Targets Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k GT_44k_32_P516215 - -
Agilent Whole Human Genome Oligo Microarray 4x44K 43413 - -
Whole Human Genome Oligo Microarray G4112A A_32_P516215 - -
Agilent Whole Human Genome Microarray 4x44K G4112F A_32_P516215 - -
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) A_16_P21046817 - -
Agilent Human 1B Microarray G4111A A_32_P516215 - -

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