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See other COL2A1 GE Assays ›
Gene Symbol:
COL2A1
Gene Name:
collagen type II alpha 1 chain
Gene Aliases:
ANFH, AOM, COL11A3, SEDC, STL1
Chromosome Location:
Chr.12: 47972965 - 48006212 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs05001163_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: COL2A1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq XM_017018828.1 XP_016874317.1 1 - 2 160 68
XM_017018829.1 XP_016874318.1 1 - 2 160 68
XM_017018830.1 XP_016874319.1 1 - 2 160 68

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More Information


Set Membership:

Amplicon length less than or equal to 70 Homo sapiens Probe spans exons

Panther Classification:

Molecular Function -

extracellular matrix structural protein

Gene Ontology Categories:

Function(s) Process(es)

skeletal system development
cartilage condensation
tissue homeostasis
endochondral ossification
chondrocyte differentiation
heart morphogenesis
proteoglycan metabolic process
central nervous system development
visual perception
sensory perception of sound
regulation of gene expression
extracellular matrix organization
collagen fibril organization
collagen catabolic process
notochord development
inner ear morphogenesis
regulation of immune response
cartilage development
palate development
limb bud formation
embryonic skeletal joint morphogenesis
cartilage development involved in endochondral bone morphogenesis
otic vesicle development
cellular response to BMP stimulus
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
extracellular matrix structural constituent conferring tensile strength
identical protein binding
metal ion binding
platelet-derived growth factor binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000546804.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000546804.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000546804.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000546804.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000546804.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000546804.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000546804.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000546804.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000546804.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000546804.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000552958.1 Ensembl
Affymetrix Human Clariom D Assay TC1200010563.hg.1 ENST00000552958.1 Ensembl

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