Name: [Hs04406436_m1] [LINC01163]
Creator: Thermo Fisher Scientific
Keywords: [LINC01163] Assay, [long intergenic non-protein coding RNA 1163] Assay

Assay Details

Gene Symbol: LINC01163
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_120619.1		1 - 2	70		75
GenBank mRNA	AK124226.1	-	2 - 3	145		75

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DB130795.1	-	2 - 3	145	Chr. 10 - 128181136 - 128306222 [+] on Build GRCh38	75
GenBankmRNA	DB132426.1	-	2 - 3	193	Chr. 10 - 128181032 - 128306183 [+] on Build GRCh38	75
GenBankmRNA	DB156115.1	-	2 - 3	145	Chr. 10 - 128181136 - 128306290 [+] on Build GRCh38	75
GenBankmRNA	DB155248.1	-	3 - 4	476	Chr. 10 - 128181047 - 128287423 [+] on Build GRCh38	75

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	marker of proliferation Ki-67	MKI67	KIA, MIB-, MIB-1, PPP1R105	-159.6kb	Anti-sense	Chr. 10 - 128096659 - 128126405 on NCBI Build GRCh38
Downstream	O-6-methylguanine-DNA methyltransferase	MGMT		1.2mb	Sense	Chr. 10 - 129467184 - 129770983 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000009303.hg.1

Set Membership:

Amplicon length between 71 and 85

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	TC1000009303.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000163763.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000163763.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000163763.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000163763.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000163763.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000163763.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000163763.hg.1	TC1000009303.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000163762.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000163762.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000163762.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000163762.hg.1	ENST00000626518.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000163762.hg.1	ENST00000630252.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000163762.hg.1	NR_120619.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000163762.hg.1	TC1000009303.hg.1	Clariom D TC

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Catalog #	4426961
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Genomic Map