Name: [Hs04403298_m1] [LOC100506470]
Creator: Thermo Fisher Scientific
Keywords: [LOC100506470] Assay, [uncharacterized LOC100506470] Assay

Assay Details

Gene Symbol: LOC100506470
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109919.1		1 - 2	272		98
GenBank mRNA	BX106486.1	-	1 - 2	217		98

Interrogated Sequence		Translated Protein	Exon Boundary	Transcript Location	Amplicon Length
GenBankmRNA	AI017957.1	-	1 - 2	Chr. 20 - 61079140 - 61080179 [-] on Build GRCh38	98
GenBankmRNA	AA971374.1	-	1 - 2	Chr. 20 - 61079191 - 61080179 [-] on Build GRCh38	98
GenBankmRNA	AI223275.1	-	1 - 2	Chr. 20 - 61079152 - 61080179 [-] on Build GRCh38	98
GenBankmRNA	AA884738.1	-	1 - 2	Chr. 20 - 61079174 - 61080173 [-] on Build GRCh38	98

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 548ag-2	MIR548AG2		-514.4kb	Sense	Chr. 20 - 60564562 - 60564625 on NCBI Build GRCh38
Downstream	cadherin 4	CDH4	CAD4, R-CAD, RCAD	172.2kb	Sense	Chr. 20 - 61252426 - 61940617 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000007967.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2000007967.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007967.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007967.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007967.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007967.hg.1	NR_109919.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007967.hg.1	NR_109919.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007967.hg.1	NR_109919.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007967.hg.1	NR_109919.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007967.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155437.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000155437.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155437.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000155437.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155437.hg.1	TC2000007967.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC2000007967.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000007967.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000007967.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000007967.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000007967.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	TC2000007967.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	TC2000007967.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	TC2000007967.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	TC2000007967.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155435.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000155435.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155435.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000155435.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155435.hg.1	TC2000007967.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000155434.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155434.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155434.hg.1	TC2000007967.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000155440.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000155440.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155440.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000155440.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155440.hg.1	TC2000007967.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000155438.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000155438.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155438.hg.1	ENST00000441660.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000155438.hg.1	NR_109919.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155438.hg.1	TC2000007967.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map