Name: [Hs04403276_m1] [CTD-3080P12.3]
Creator: Thermo Fisher Scientific
Keywords: [CTD-3080P12.3] Assay, [uncharacterized LOC101928857] Assay

Assay Details

Gene Symbol: CTD-3080P12.3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109911.1		1 - 2	167		108
GenBank mRNA	AK091791.1	-	1 - 2	167		108
GenBank mRNA	BC032469.1	-	1 - 2	154		108

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DA583970.1	-	1 - 2	167	Chr. 5 - 1176173 - 1178605 [-] on Build GRCh38	108
GenBankmRNA	BM922064.1	-	1 - 2	161	Chr. 5 - 1175466 - 1178594 [-] on Build GRCh38	108
GenBankmRNA	BQ882145.1	-		123	Chr. - - [-] on Build	108
GenBankmRNA	BI771110.1	-	1 - 2	153	Chr. 5 - 1175624 - 1178591 [-] on Build GRCh38	108

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	solute carrier family 12 member 7	SLC12A7	KCC4	-20.2kb	Sense	Chr. 5 - 1050374 - 1155887 on NCBI Build GRCh38
Downstream	solute carrier family 6 member 19	SLC6A19	B0AT1, HND	23.0kb	Anti-sense	Chr. 5 - 1201595 - 1225117 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500009846.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169484.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169484.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169484.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169484.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169484.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169484.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169484.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169484.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169484.hg.1	TC0500009846.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500169486.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169486.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169486.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169486.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169486.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169486.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169486.hg.1	TC0500009846.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500169479.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169479.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169479.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169479.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169479.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169479.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169479.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169479.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169479.hg.1	TC0500009846.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	TC0500009846.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169480.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169480.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169480.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169480.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169480.hg.1	ENST00000505972.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169480.hg.1	ENST00000512572.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169480.hg.1	ENST00000514376.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500169480.hg.1	NR_109911.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500169480.hg.1	TC0500009846.hg.1	Clariom D TC

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Catalog #	4426961
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Genomic Map