LOC100133050
Genomic Map
Back To TopAssay Details
| Gene Symbol: LOC100133050 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_027503.1 | 2 - 3 | 219 | 78 | ||
| GenBank mRNA | BI830432.1 | - | 2 - 3 | 218 | 78 | |
| BQ109458.1 | - | 2 - 3 | 219 | 78 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | uncharacterized LOC102724855 | CTD-2151A2.1 | -488.7kb | Sense | Chr. 5 - 99533990 - 99577954 on NCBI Build GRCh38 | |
| Downstream | family with sequence similarity 174 member A | FAM174A |
HGS_RE408, TMEM157, UNQ1912 |
153.9kb | Anti-sense | Chr. 5 - 100535305 - 100586741 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0500011575.hg.1This assay targets the same location as HTA transcript cluster(s) TC05001635.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Homo sapiens
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 482368 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 944823 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 270410 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 268999 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 338200 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 56679 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_24_P597190 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_32_P39003 | - | - |
| Agilent Whole Human Genome Oligo Microarray 4x44K | 24761 | - | - |
| Agilent Whole Human Genome Oligo Microarray 4x44K | 17381 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 37915 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 19100 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_24_P597190 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_32_P39003 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_32_P39003 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_24_P597190 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P04140322 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P04140322 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P04140321 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR05022250.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR05022250.hg.1 | TC05001635.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR05022247.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR05022247.hg.1 | TC05001635.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011573.hg.1 | ENST00000621951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011573.hg.1 | ENST00000621951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011573.hg.1 | ENST00000621951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011573.hg.1 | ENST00000621951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011573.hg.1 | ENST00000621951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR05022248.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR05022248.hg.1 | TC05001635.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR05022249.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR05022249.hg.1 | TC05001635.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | ENST00000502652.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | ENST00000502652.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | ENST00000502652.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | ENST00000502652.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | ENST00000510302.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | ENST00000510302.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500011575.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | ENST00000502652.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | ENST00000502652.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | ENST00000502652.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | ENST00000502652.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | ENST00000510302.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | ENST00000510302.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500008189.hg.1 | NR_110562.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500011573.hg.1 | ENST00000621951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500011573.hg.1 | ENST00000621951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500011573.hg.1 | ENST00000621951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500011573.hg.1 | ENST00000621951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500011573.hg.1 | ENST00000621951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500180130.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180130.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180130.hg.1 | TC0500011575.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0500180133.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500180133.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180133.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500180133.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180133.hg.1 | TC0500011575.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0500180129.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500180129.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180129.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500180129.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180129.hg.1 | TC0500011575.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0500180132.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500180132.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180132.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500180132.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180132.hg.1 | TC0500011575.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0500180134.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180134.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180134.hg.1 | TC0500011575.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0500180131.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500180131.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180131.hg.1 | ENST00000621479.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500180131.hg.1 | NR_027503.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500180131.hg.1 | TC0500011575.hg.1 | Clariom D TC |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A027175 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A027175 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3239401 | NR_027503.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3239401 | BI830432.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3239401 | BQ109458.1 | human_transcriptome |
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