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See other TFAM GE Assays ›
Gene Symbol:
TFAM
Gene Name:
transcription factor A, mitochondrial
Gene Aliases:
MTTF1, MTTFA, TCF6, TCF6L1, TCF6L2, TCF6L3
Chromosome Location:
Chr.10: 58385143 - 58399230 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs04332762_m1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: TFAM
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_073073.1 3 - 4 686 95
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BF085659.1 - 156 Chr. - - [-] on Build 95
GenBankmRNA BI831665.1 - 3 - 4 502 Chr. 10 - 58385345 - 58388822 [+] on Build GRCh38 95

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream ubiquitin conjugating enzyme E2 D1 UBE2D1 E2(17)KB1,
SFT,
UBC4/5,
UBCH5,
UBCH5A
-15.9kb Sense Chr. 10 - 58334979 - 58370753 on NCBI Build GRCh38
Downstream BicC family RNA binding protein 1 BICC1 BICC,
CYSRD
124.7kb Sense Chr. 10 - 58512970 - 58831437 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000007701.hg.1

Set Membership:

Amplicon length between 86 and 100 Homo sapiens Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

DNA-dependent DNA replication
regulation of transcription from RNA polymerase I promoter
transcription from RNA polymerase II promoter
transcription from mitochondrial promoter
transcription initiation from mitochondrial promoter
mitochondrion organization
mitochondrial respiratory chain complex assembly
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcription coactivator binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
protein binding
DNA binding, bending
heat shock protein binding
poly(A) RNA binding
mitochondrial light strand promoter sense binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 ENST00000373895.7 Ensembl
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 ENST00000373899.3 Ensembl
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 ENST00000395377.2 Ensembl
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 ENST00000487519.5 Ensembl
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 NM_001270782.1 Refseq
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 NM_003201.2 Refseq
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 NR_073073.1 Refseq
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 ENST00000373895.7 Ensembl
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 ENST00000373899.3 Ensembl
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 ENST00000395377.2 Ensembl
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 ENST00000487519.5 Ensembl
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 NM_001270782.1 Refseq
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 NM_003201.2 Refseq
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 NR_073073.1 Refseq
Affymetrix Human Clariom D Assay PSR1000152333.hg.1 TC1000007701.hg.1 Clariom D TC

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