Name: [Hs04332361_m1] [SHANK2-AS1]
Creator: Thermo Fisher Scientific
Keywords: [SHANK2-AS1] Assay, [SHANK2 antisense RNA 1] Assay

Assay Details

Gene Symbol: SHANK2-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046567.1		2 - 3	292		114
GenBank mRNA	AK097446.1	-	2 - 3	292		114

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB028406.1	-	2 - 3	292		Chr. 11 - 70631094 - 70633793 [+] on Build GRCh38	114

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SH3 and multiple ankyrin repeat domains 2	SHANK2	AUTS17, CORTBP1, CTTNBP1, ProSAP1, SHANK, SPANK-3		Anti-sense	Chr. 11 - 70467856 - 71252724 on NCBI Build GRCh38
Downstream	SHANK2 antisense RNA 3	SHANK2-AS3	C11orf76	227.3kb	Sense	Chr. 11 - 70862790 - 70865115 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100008282.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1100008282.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100008282.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100008282.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100008282.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100008282.hg.1	NR_046567.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100008282.hg.1	NR_046567.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100008282.hg.1	NR_046567.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100008282.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	TC1100008282.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100008282.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100008282.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100008282.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100008282.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	TC1100008282.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	TC1100008282.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	TC1100008282.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100161123.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100161123.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100161123.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100161123.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100161123.hg.1	TC1100008282.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100161124.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100161124.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100161124.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100161124.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100161124.hg.1	TC1100008282.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100161122.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100161122.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100161122.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100161122.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100161122.hg.1	TC1100008282.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100161125.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100161125.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100161125.hg.1	ENST00000429561.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100161125.hg.1	NR_046567.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100161125.hg.1	TC1100008282.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map