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See other LOC100652999 GE Assays ›
Gene Symbol:
LOC100652999
Gene Name:
uncharacterized LOC100652999
Gene Aliases:
-
Chromosome Location:
Chr.12: 53513984 - 53517608 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs04332209_m1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: LOC100652999
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_046221.1 2 - 3 199 89
GenBank mRNA AK027179.1 - 2 - 3 162 89
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BI823006.1 - 2 - 3 200 Chr. 12 - 53513988 - 53515903 [+] on Build GRCh38 89
GenBankmRNA DA076996.1 - 2 - 3 283 Chr. 12 - 53513900 - 53515803 [+] on Build GRCh38 89

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream activating transcription factor 7 ATF7 ATFA Anti-sense Chr. 12 - 53507856 - 53626415 on NCBI Build GRCh38
Downstream ATP synthase,
H+ transporting,
mitochondrial Fo complex subunit C2 (subunit 9)
ATP5G2 ATP5A 147.6kb Anti-sense Chr. 12 - 53665160 - 53677546 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200007719.hg.1

Set Membership:

Amplicon length between 86 and 100 3' Most Homo sapiens 1700 Probe spans exons

MicroArray Probes:

Agilent Affymetrix ABI

Array Name Probe IDs Targets Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k GT_44k_24_P750159 - -
Agilent Whole Human Genome Oligo Microarray 4x44K 17951 - -
Whole Human Genome Oligo Microarray G4112A A_24_P750159 - -
Agilent Whole Human Genome Microarray 4x44K G4112F A_24_P750159 - -
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) A_16_P02622572 - -
Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 TC1200007719.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200007719.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200007719.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1200007719.hg.1 NR_046221.1 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200007719.hg.1 NR_046221.1 Refseq
Affymetrix Human Transcriptome Array 2.0 TC1200007719.hg.1 NR_046221.1 Refseq
Affymetrix Human Clariom D Assay TC1200007719.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Clariom D Assay TC1200007719.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Clariom D Assay TC1200007719.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Clariom D Assay TC1200007719.hg.1 NR_046221.1 Refseq
Affymetrix Human Clariom D Assay TC1200007719.hg.1 NR_046221.1 Refseq
Affymetrix Human Clariom D Assay TC1200007719.hg.1 NR_046221.1 Refseq
Affymetrix Human Clariom D Assay PSR1200155473.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Clariom D Assay PSR1200155473.hg.1 NR_046221.1 Refseq
Affymetrix Human Clariom D Assay PSR1200155473.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Clariom D Assay PSR1200155473.hg.1 NR_046221.1 Refseq
Affymetrix Human Clariom D Assay PSR1200155473.hg.1 TC1200007719.hg.1 Clariom D TC
Affymetrix Human Clariom D Assay PSR1200155474.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Clariom D Assay PSR1200155474.hg.1 NR_046221.1 Refseq
Affymetrix Human Clariom D Assay PSR1200155474.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Clariom D Assay PSR1200155474.hg.1 NR_046221.1 Refseq
Affymetrix Human Clariom D Assay PSR1200155474.hg.1 TC1200007719.hg.1 Clariom D TC
Affymetrix Human Clariom D Assay PSR1200155472.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Clariom D Assay PSR1200155472.hg.1 NR_046221.1 Refseq
Affymetrix Human Clariom D Assay PSR1200155472.hg.1 ENST00000548347.1 Ensembl
Affymetrix Human Clariom D Assay PSR1200155472.hg.1 NR_046221.1 Refseq
Affymetrix Human Clariom D Assay PSR1200155472.hg.1 TC1200007719.hg.1 Clariom D TC
Human Genome U133 Plus 2.0 Array 232732_PM_at - -
Human Genome U133 Plus 2.0 Array 232732_at - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at9 - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at3 - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at10 - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at2 - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at5 - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at8 - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at11 - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at1 - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at6 - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at7 - -
Affymetrix Human Genome U133 Plus 2.0 Array 232732_at4 - -
Human Genome U133 Set 232732_PM_at - -
Human Genome U133 Set 232732_at - -
Array Name Probe IDs Targets Target Type
ABI Human Genome Survey Microarray Version 2.0 186527 - -

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