MIR885
Genomic Map
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| Gene Symbol: MIR885 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_030614.1 | 1 | 31 | 74 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | microRNA 378b | MIR378B | -64.2kb | Anti-sense | Chr. 3 - 10330229 - 10330285 on NCBI Build GRCh38 | |
| Downstream | ATP2B2 intronic transcript 2 | ATP2B2-IT2 | 231.5kb | Sense | Chr. 3 - 10626015 - 10626807 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.This assay targets the same location as Clariom D transcript cluster(s) TC0300010243.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03001161.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188068 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055693 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188065 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188088 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188061 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055694 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055660 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055656 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055684 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188058 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188051 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055698 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15411879 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055675 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188093 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188089 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055672 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055662 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055690 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188077 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055686 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188075 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188060 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055661 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188091 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055658 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055681 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055657 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188067 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055677 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188056 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055686 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15411879 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055690 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055662 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055657 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188058 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055693 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188068 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055684 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055675 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188077 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055681 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055656 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188060 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055698 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188067 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055661 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188091 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188061 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188088 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188093 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055660 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055694 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055672 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188075 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055677 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188089 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188051 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188065 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22188056 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02055658 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | TC0300010243.hg.1 | ENST00000401316.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300010243.hg.1 | NR_030614.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR03020132.hg.1 | ENST00000401316.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR03020132.hg.1 | NR_030614.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR03020132.hg.1 | TC03001161.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | TC0300010243.hg.1 | ENST00000401316.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300010243.hg.1 | NR_030614.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300174824.hg.1 | ENST00000401316.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300174824.hg.1 | NR_030614.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300174824.hg.1 | ENST00000401316.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300174824.hg.1 | NR_030614.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300174824.hg.1 | TC0300010243.hg.1 | Clariom D TC |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3309329 | NR_030614.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3309329 | NR_030614.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3309329 | NR_030614.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3309329 | NR_030614.1 | human_transcriptome |
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