Name: [Hs04273370_s1] [VTRNA2-1]
Creator: Thermo Fisher Scientific
Keywords: [VTRNA2-1] Assay, [vault RNA 2-1] Assay

Assay Details

Gene Symbol: VTRNA2-1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_030583.3		1	44		62

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BU957887.1	-		84		Chr. - - [-] on Build	62
GenBankmRNA	DW457304.1	-		59		Chr. - - [-] on Build	62

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	transforming growth factor beta induced	TGFBI	BIGH3, CDB1, CDG2, CDGG1, CSD, CSD1, CSD2, CSD3, EBMD, LCD1	-16.7kb	Anti-sense	Chr. 5 - 136028895 - 136063818 on NCBI Build GRCh38
Downstream	SMAD5 antisense RNA 1	SMAD5-AS1	DAMS, SMAD5AS, SMAD5OS	48.9kb	Sense	Chr. 5 - 136129513 - 136134890 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500012123.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05001810.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303413	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303378	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303384	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303379	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481358	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303402	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303388	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303430	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303403	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481341	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481349	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303405	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481357	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303410	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303425	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303386	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303395	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481320	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303398	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303392	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303415	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481333	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481340	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481362	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303381	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481330	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481355	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15743541	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481365	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481353	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303396	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303409	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303427	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303404	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303418	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303412	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303432	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481353	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481341	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303384	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303378	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303430	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481340	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303413	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481365	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303405	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303404	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15743541	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303410	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481349	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481362	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303432	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481333	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303381	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303396	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303427	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303395	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303388	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303402	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481357	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481330	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303415	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481355	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303425	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303398	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481358	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303412	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303418	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303409	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24481320	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303379	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303392	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303403	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04303386	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05024602.hg.1	ENST00000365160.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05024602.hg.1	NR_030583.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05024602.hg.1	TC05001810.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0500012123.hg.1	ENST00000365160.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012123.hg.1	ENST00000602301.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012123.hg.1	ENST00000602301.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012123.hg.1	NR_030583.3	Refseq
Affymetrix Human Clariom D Assay	TC0500012123.hg.1	ENST00000365160.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012123.hg.1	ENST00000602301.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012123.hg.1	ENST00000602301.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012123.hg.1	NR_030583.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500183902.hg.1	ENST00000365160.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183902.hg.1	ENST00000602301.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183902.hg.1	NR_030583.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500183902.hg.1	ENST00000365160.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183902.hg.1	ENST00000602301.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500183902.hg.1	NR_030583.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500183902.hg.1	TC0500012123.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3310643	NR_030583.2	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3310643	NR_030583.2	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3310643	NR_030583.2	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3310643	NR_030583.2	human_transcriptome

Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map