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See other MAVS GE Assays ›
Gene Symbol:
MAVS
Gene Name:
mitochondrial antiviral signaling protein
Gene Aliases:
CARDIF, IPS-1, IPS1, VISA
Chromosome Location:
Chr.20: 3846799 - 3876123 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs04232346_m1
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Catalog # 4426961
Price 373.00
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: MAVS
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001206491.1 NP_001193420.1 2 - 3 290 82
GenBank mRNA AK291785.1 - 2 - 3 249 82
BX649084.1 - 2 - 3 251 82
EF467323.1 - 1 - 2 118 82
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DA863840.1 - 2 - 3 249 Chr. 20 - 3846840 - 3862407 [+] on Build GRCh38 82
GenBankmRNA DA384852.1 - 1 - 2 95 Chr. 20 - 3854648 - 3864387 [+] on Build GRCh38 82
GenBankmRNA DA454540.1 - 2 - 3 252 Chr. 20 - 3846837 - 3862414 [+] on Build GRCh38 82
GenBankmRNA DA253104.1 - 2 - 3 255 Chr. 20 - 3846834 - 3862400 [+] on Build GRCh38 82
GenBankmRNA DB140198.1 - 2 - 3 252 Chr. 20 - 3846837 - 3862366 [+] on Build GRCh38 82

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream adaptor related protein complex 5 sigma 1 subunit AP5S1 C20orf29 -29.3kb Sense Chr. 20 - 3820524 - 3825307 on NCBI Build GRCh38
Downstream pantothenate kinase 2 PANK2 C20orf48,
HARP,
HSS,
NBIA1,
PKAN
27.3kb Sense Chr. 20 - 3888839 - 3929882 on NCBI Build GRCh38

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More Information


Additional Information:

This assay is in the 5'UTR region of the AK291785.1, NM_001206491.1 transcripts.

Set Membership:

Amplicon length between 71 and 85 Homo sapiens Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

positive regulation of protein phosphorylation
activation of innate immune response
positive regulation of defense response to virus by host
signal transduction
negative regulation of type I interferon production
positive regulation of interferon-alpha production
positive regulation of interferon-beta production
positive regulation of interleukin-8 production
positive regulation of tumor necrosis factor production
positive regulation of protein import into nucleus, translocation
RIG-I signaling pathway
defense response to bacterium
positive regulation of transcription factor import into nucleus
positive regulation of I-kappaB kinase/NF-kappaB signaling
negative regulation of viral genome replication
innate immune response
positive regulation of transcription from RNA polymerase II promoter
positive regulation of sequence-specific DNA binding transcription factor activity
defense response to virus
positive regulation of type I interferon-mediated signaling pathway
cellular response to exogenous dsRNA
positive regulation of chemokine (C-C motif) ligand 5 production
positive regulation of IP-10 production
regulation of peroxisome organization
signal transducer activity
protein binding
protein kinase binding
CARD domain binding

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