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See other MIR3178 GE Assays ›
Gene Symbol:
MIR3178
Gene Name:
microRNA 3178
Gene Aliases:
mir-3178
Chromosome Location:
Chr.16: 2531922 - 2532005 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs04231816_s1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: MIR3178
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_036139.1 1 39 53
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DB334915.1 - 1 368 Chr. 16 - 2531799 - 2532331 [-] on Build GRCh38 53

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream cementum protein 1 CEMP1 CP-23,
CP23
-514.0 Sense Chr. 16 - 2530035 - 2531408 on NCBI Build GRCh38
Downstream 3-phosphoinositide dependent protein kinase 1 PDPK1 PDK1,
PDPK2,
PDPK2P,
PRO0461
6.0kb Anti-sense Chr. 16 - 2537964 - 2603190 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC1600009121.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000785.hg.1

Set Membership:

Amplicon length less than or equal to 70 3' Most Detect Genomic DNA Homo sapiens Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 TC1600009121.hg.1 ENST00000581887.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC1600009121.hg.1 NR_036139.1 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR16011547.hg.1 NR_036139.1 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR16011547.hg.1 TC16000785.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR1600169428.hg.1 ENST00000581887.1 Ensembl
Affymetrix Human Clariom D Assay PSR1600169428.hg.1 NR_036139.1 Refseq
Affymetrix Human Clariom D Assay PSR1600169428.hg.1 ENST00000581887.1 Ensembl
Affymetrix Human Clariom D Assay PSR1600169428.hg.1 NR_036139.1 Refseq
Affymetrix Human Clariom D Assay PSR1600169428.hg.1 TC1600009121.hg.1 Clariom D TC
Affymetrix Human Clariom D Assay TC1600009121.hg.1 ENST00000581887.1 Ensembl
Affymetrix Human Clariom D Assay TC1600009121.hg.1 NR_036139.1 Refseq

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