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See other XPOT GE Assays ›
Gene Symbol:
XPOT
Gene Name:
exportin for tRNA
Gene Aliases:
XPO3
Chromosome Location:
Chr.12: 64404350 - 64451125 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs03870584_s1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: XPOT
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq XM_017018748.1 XP_016874237.1 25 4490 93
GenBank mRNA AK098081.1 - 1 647 93
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CF146748.1 - 1 127 Chr. 12 - 64449247 - 64449880 [+] on Build GRCh38 93
GenBankmRNA BQ946133.1 - 1 305 Chr. 12 - 64449064 - 64449972 [+] on Build GRCh38 93
GenBankmRNA CF146848.1 - 1 127 Chr. 12 - 64449247 - 64449894 [+] on Build GRCh38 93
GenBankmRNA CD357397.1 - 1 448 Chr. 12 - 64448922 - 64449669 [+] on Build GRCh38 93
GenBankmRNA CF146723.1 - 1 127 Chr. 12 - 64449247 - 64449907 [+] on Build GRCh38 93
GenBankmRNA BI027661.1 - 1 Chr. 12 - 64449296 - 64449634 [-] on Build GRCh38 93

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream ribosomal protein S11 pseudogene 6 RPS11P6 RPS11_2_1249 -51.7kb Sense Chr. 12 - 64396010 - 64397000 on NCBI Build GRCh38
Downstream TANK binding kinase 1 TBK1 FTDALS4,
NAK,
T2K
937.0 Sense Chr. 12 - 64452060 - 64502119 on NCBI Build GRCh38

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Amplicon length between 86 and 100 3' Most Detect Genomic DNA Homo sapiens Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

tRNA export from nucleus
intracellular protein transport
tRNA re-export from nucleus
tRNA binding
Ran GTPase binding
nucleobase-containing compound transmembrane transporter activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 TC0200011078.hg.1 ENST00000628409.1 Ensembl
Affymetrix Human Clariom D Assay TC0200011078.hg.1 ENST00000628409.1 Ensembl

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