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Gene Symbol:
GCM1
Gene Name:
glial cells missing homolog 1
Gene Aliases:
GCMA, hGCMa
Chromosome Location:
Chr.6: 53125644 - 53262803 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs03845634_s1
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Catalog # 4426961
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: GCM1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq XM_017011390.1 XP_016866879.1 10 5112 99
GenBank mRNA AF075013.1 - 1 152 99
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AI741641.1 - 1 Chr. 6 - 53125644 - 53126108 [+] on Build GRCh38 99
GenBankmRNA R64634.1 - 133 Chr. - - [-] on Build 99
GenBankmRNA R62499.1 - 152 Chr. - - [-] on Build 99
GenBankmRNA R64197.1 - 248 Chr. - - [-] on Build 99
GenBankmRNA R23810.1 - 151 Chr. - - [-] on Build 99
GenBankmRNA AI741630.1 - 1 Chr. 6 - 53125644 - 53126108 [+] on Build GRCh38 99
GenBankmRNA BX092987.1 - 1 150 Chr. 6 - 53125644 - 53126137 [-] on Build GRCh38 99

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream F-box protein 9 FBXO9 FBX9,
NY-REN-57,
VCIA1,
dJ341E18.2
-24.8kb Anti-sense Chr. 6 - 53057807 - 53100873 on NCBI Build GRCh38

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Amplicon length between 86 and 100 3' Most Detect Genomic DNA Homo sapiens Both primers and probe map within a single exon

Gene Ontology Categories:

Function(s) Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
anatomical structure morphogenesis
gliogenesis
positive regulation of transcription from RNA polymerase II promoter
calcium ion homeostasis
astrocyte fate commitment
positive regulation of syncytium formation by plasma membrane fusion
branching involved in labyrinthine layer morphogenesis
cell differentiation involved in embryonic placenta development
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
transcription factor binding
zinc ion binding
histone deacetylase binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 TC0600012063.hg.1 ENST00000566420.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC0600012063.hg.1 ENST00000566420.1 Ensembl
Affymetrix Human Clariom D Assay TC0600012063.hg.1 ENST00000566420.1 Ensembl
Affymetrix Human Clariom D Assay TC0600012063.hg.1 ENST00000566420.1 Ensembl

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