MAPT-IT1
Genomic Map
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| Gene Symbol: MAPT-IT1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_024560.1 | 1 | 2854 | 90 | ||
| GenBank mRNA | BF108492.1 | - | 1 | 90 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | MAPT antisense RNA 1 | MAPT-AS1 | -270.0 | Anti-sense | Chr. 17 - 45843356 - 45895513 on NCBI Build GRCh38 | |
| Downstream | saitohin | STH | MAPTIT | 100.4kb | Sense | Chr. 17 - 45999250 - 45999694 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as HTA transcript cluster(s) TC17000593.hg.1, TC17_ctg5_hap1000019.hg.1Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3230439 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4632 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4631 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 3797 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3230439 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3230439 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340077 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914706 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340084 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340091 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914701 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914707 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340082 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340075 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914703 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914700 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340078 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914709 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340085 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340086 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914690 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914700 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340078 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914707 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340091 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914703 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340077 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914701 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340082 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914706 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914709 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340075 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340084 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340085 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10340086 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30914690 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16987997 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340089 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340075 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340094 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340081 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340079 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340082 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16987983 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340087 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340091 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16987988 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340077 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340095 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340086 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10340084 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR17007270.hg.1 | NR_024560.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17007270.hg.1 | TC17000593.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR17_ctg5_hap1000229.hg.1 | NR_024560.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17_ctg5_hap1000229.hg.1 | TC17_ctg5_hap1000019.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC1700008083.hg.1 | ENST00000624111.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700008083.hg.1 | ENST00000624111.2 | Ensembl |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A009617 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A009617 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3247621 | NR_024560.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3247621 | AK091698.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3247621 | NR_024560.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3247621 | AK091698.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3247621 | NR_024560.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3247621 | AK091698.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3247621 | NR_024560.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3247621 | AK091698.1 | human_transcriptome |
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