Name: [Hs03677983_m1] [C1RL-AS1]
Creator: Thermo Fisher Scientific
Keywords: [C1RL-AS1] Assay, [C1RL antisense RNA 1] Assay

Assay Details

Gene Symbol: C1RL-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_026947.1		10 - 11	5010		64
GenBank mRNA	AK091792.1	-	7 - 8	1562		64
	AL833364.1	-	10 - 11	5010		64
	AY358730.1	-	2 - 3	73		64

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	retinol binding protein 5	RBP5	CRBP-III, CRBP3, CRBPIII, HRBPiso		Anti-sense	Chr. 12 - 7119106 - 7130272 on NCBI Build GRCh38
Downstream	calsyntenin 3	CLSTN3	CDHR14, CSTN3, alcbeta	9.7kb	Sense	Chr. 12 - 7130371 - 7158945 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200006667.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12000106.hg.1

Additional Information:

This assay is in the 5'UTR region of the AY358730.1 transcripts.

Set Membership:

Amplicon length less than or equal to 70

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000382215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000435921.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000435921.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000435921.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000435921.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000435921.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000435921.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000435921.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000435921.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000535078.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000535078.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000536679.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000536679.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000536679.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000536679.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000536679.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000536679.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000541775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000545775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000545775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000545775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	ENST00000545775.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200006667.hg.1	NR_026947.1	Refseq

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Catalog #	4426961
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Genomic Map