Name: [Hs03676993_s1] [VTRNA1-1]
Creator: Thermo Fisher Scientific
Keywords: [VTRNA1-1] Assay, [vault RNA 1-1] Assay

Assay Details

Gene Symbol: VTRNA1-1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_026703.1		1	48		64

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DW439004.1	-		65	Chr. - - [-] on Build	64
GenBankmRNA	AF045143.3	-	1	48	Chr. 5 - 140711276 - 140711373 [+] on Build GRCh38	64
GenBankmRNA	DA244709.1	-	1	109	Chr. 5 - 140711215 - 140733281 [+] on Build GRCh38	64
GenBankmRNA	BU566463.1	-	1	51	Chr. 5 - 140711275 - 140711576 [+] on Build GRCh38	64

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	zinc finger matrin-type 2	ZMAT2	Ptg-12, Snu23	-4.6kb	Sense	Chr. 5 - 140700360 - 140706681 on NCBI Build GRCh38
Downstream	vault RNA 1-2	VTRNA1-2	HVG2, VAULTRC2, VR2, hvg-2	7.6kb	Sense	Chr. 5 - 140718926 - 140719013 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500008867.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05000734.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_4725	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3408227	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04324536	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04324542	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24502677	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24502672	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24502685	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24502671	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04324541	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04324530	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04324543	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15746534	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24502680	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04324542	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15746534	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24502672	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24502677	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24502680	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24502671	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P24502685	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04324536	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04324541	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04324530	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P04324543	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324528	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324546	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324495	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324517	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324536	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324532	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324534	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324504	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324541	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324511	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324530	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324515	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324553	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324543	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324499	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324498	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324507	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324502	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P04324513	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	8108628	-	-
Affymetrix Human Gene 1.1 ST Array	8108627	-	-
Affymetrix Human Transcriptome Array 2.0	PSR05010636.hg.1	ENST00000363120.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010636.hg.1	NR_026703.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05010636.hg.1	TC05000734.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0500008867.hg.1	ENST00000363120.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500008867.hg.1	NR_026703.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00007328.hg.1	ENST00000362552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500161532.hg.1	ENST00000363120.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500161532.hg.1	NR_026703.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500161532.hg.1	ENST00000363120.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500161532.hg.1	NR_026703.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500161532.hg.1	TC0500008867.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500008867.hg.1	ENST00000363120.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500008867.hg.1	NR_026703.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00007328.hg.1	ENST00000362552.1	Ensembl

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3309759	NR_026703.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3309759	NR_026703.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3309759	NR_026703.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3309759	NR_026703.1	human_transcriptome

Availability	Made To Order
Catalog #	4426961
Price	373.00
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System Message

Genomic Map