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Gene Symbol:
SEC13
Gene Name:
Gene Aliases:
Species:
Human
Species Specific ID (Flybase ID):
Assay ID Hs03645405_m1
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Catalog # 4426961
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Assay Details

Gene Symbol: SEC13
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001136026.2 NP_001129498.1 3 - 4 357 109
NM_030673.3 NP_109598.2 3 - 4 213 109
XM_005265379.2 XP_005265436.1 3 - 4 230 109
XM_017007019.1 XP_016862508.1 3 - 4 267 109
XM_017007020.1 XP_016862509.1 2 - 3 74 109
GenBank mRNA AK301999.1 - 3 - 4 281 109
BC002634.2 - 3 - 4 94 3605545 109
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AL555288.3 - 3 - 4 253 Chr. 3 - 10305032 - 10321084 [-] on Build GRCh38 109
GenBankmRNA DB087344.1 - 3 - 4 255 Chr. 3 - 10315142 - 10321086 [-] on Build GRCh38 109
GenBankmRNA BP317384.1 - 3 - 4 137 Chr. 3 - 10305655 - 10321112 [-] on Build GRCh38 109
GenBankmRNA BQ218977.1 - 118 Chr. - - [-] on Build 109
GenBankmRNA BE388246.1 - 2 - 3 75 Chr. 3 - 10305630 - 10319173 [-] on Build GRCh38 109
GenBankmRNA CN420184.1 - 2 - 3 90 Chr. 3 - 10305125 - 10319173 [-] on Build GRCh38 109
GenBankmRNA DC396674.1 - 3 - 4 281 Chr. 3 - 10312595 - 10321112 [-] on Build GRCh38 109
GenBankmRNA CX787788.1 - 3 - 4 110 Chr. 3 - 10304046 - 10321085 [-] on Build GRCh38 109
GenBankmRNA BQ637172.1 - 3 - 4 107 Chr. 3 - 10305663 - 10321082 [-] on Build GRCh38 109

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream ghrelin opposite strand/antisense RNA GHRLOS GHRL-AS1,
GHRLAS,
NCRNA00068 		-21.9kb Anti-sense Chr. 3 - 10280952 - 10293449 on NCBI Build GRCh38
Downstream ATPase plasma membrane Ca2+ transporting 2 ATP2B2 PMCA2,
PMCA2a,
PMCA2i 		5.9kb Sense Chr. 3 - 10324023 - 10707962 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300010240.hg.1

Additional Information:

This assay is in the 5'UTR region of the BC002634.2,NM_030673.3,XM_005265379.2,XM_017007020.1 transcripts.

Set Membership:

 Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Homo sapiens Probe spans exons

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix


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