SCARNA14
Genomic Map
Back To TopAssay Details
| Gene Symbol: SCARNA14 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_004388.1 | 1 | 64 | 128 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | DIS3 like exosome 3'-5' exoribonuclease | DIS3L | DIS3L1 | -13.3kb | Anti-sense | Chr. 15 - 66293257 - 66333898 on NCBI Build GRCh38 |
| Downstream | mitogen-activated protein kinase kinase 1 | MAP2K1 |
CFC3, MAPKK1, MEK1, MKK1, PRKMK1 |
39.5kb | Anti-sense | Chr. 15 - 66386873 - 66491544 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1500009823.hg.1This assay targets the same location as HTA transcript cluster(s) TC15001577.hg.1
Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4304 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4303 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723695 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216677 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216686 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216683 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216690 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216701 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216674 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723704 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216698 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723717 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216692 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723699 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216673 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723719 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216694 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216702 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216697 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216688 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216675 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216685 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723720 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723694 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216682 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723711 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216696 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216679 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723695 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723719 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216692 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216686 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723694 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216696 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723717 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216701 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216702 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216690 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216688 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723711 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216698 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216673 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216683 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216682 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723704 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216679 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216675 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216694 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216677 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723699 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216674 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216697 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30216685 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P09723720 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723698 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723704 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723689 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723719 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723696 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723715 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723691 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723705 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723707 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723711 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723692 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723721 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723717 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723713 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723694 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16799320 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723720 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723703 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723710 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723700 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16799324 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P09723709 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_004388_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 7989923 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 7989922 | - | - |
| Affymetrix Human Genome U219 Array | 11763956_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11757261_at | - | - |
| Affymetrix Human Genome U219 Array | 11757261_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11763956_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | TC1500009823.hg.1 | ENST00000516903.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1500009823.hg.1 | NR_004388.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR15015180.hg.1 | ENST00000516903.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR15015180.hg.1 | NR_004388.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR15015180.hg.1 | TC15001577.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR1500172764.hg.1 | ENST00000516903.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1500172764.hg.1 | NR_004388.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1500172764.hg.1 | ENST00000516903.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1500172764.hg.1 | NR_004388.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1500172764.hg.1 | TC1500009823.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC1500009823.hg.1 | ENST00000516903.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1500009823.hg.1 | NR_004388.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A052295 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A052295 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3247636 | NR_004388.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3247636 | NR_004388.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3247636 | NR_004388.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3247636 | NR_004388.1 | human_transcriptome |
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