ATXN3L
Genomic Map
Back To TopAssay Details
| Gene Symbol: ATXN3L | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001135995.1 | NP_001129467.1 | 1 | 244 | 116 | |
| GenBank mRNA | AK302365.1 | - | 1 | 246 | 116 | |
| DB059638.1 | - | 1 | 246 | 116 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | uncharacterized LOC105373133 | LOC105373133 | -178.0kb | Anti-sense | Chr. X - 13044544 - 13086975 on NCBI Build GRCh38 | |
| Downstream | long intergenic non-protein coding RNA 1203 | LINC01203 | 14.8kb | Anti-sense | Chr. X - 13335241 - 13341825 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0X00009095.hg.1This assay targets the same location as HTA transcript cluster(s) TC0X000866.hg.1
Additional Information:
This assay is in the 5'UTR region of the AK302365.1,NM_001135995.1 transcripts.
Set Membership: |
Amplicon length greater than or equal to 101
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
Panther Classification:
Gene Ontology Categories:
MicroArray Probes:
Affymetrix
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | ENST00000622204.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | ENST00000622204.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X011515.hg.1 | ENST00000380622.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X011515.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X011515.hg.1 | TC0X000866.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X011513.hg.1 | ENST00000380622.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X011513.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X011513.hg.1 | TC0X000866.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X011514.hg.1 | ENST00000380622.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X011514.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR0X011514.hg.1 | TC0X000866.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00162305.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00162305.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00162305.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00162305.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00162305.hg.1 | TC0X00009095.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0X00162306.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00162306.hg.1 | ENST00000622204.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00162306.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00162306.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00162306.hg.1 | ENST00000622204.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0X00162306.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00162306.hg.1 | TC0X00009095.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0X00162309.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00162309.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00162309.hg.1 | TC0X00009095.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | ENST00000431486.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00006643.hg.1 | NR_046087.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | ENST00000380622.3 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | ENST00000622204.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | ENST00000622204.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009095.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00162308.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00162308.hg.1 | NM_001135995.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0X00162308.hg.1 | TC0X00009095.hg.1 | Clariom D TC |
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