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See other PTPN22 GE Assays ›
Gene Symbol:
PTPN22
Gene Name:
protein tyrosine phosphatase, non-receptor type 22
Gene Aliases:
LYP, LYP1, LYP2, PEP, PTPN8
Chromosome Location:
Chr.1: 113813811 - 113871761 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01587521_m1
Size
Availability Made To Order
Catalog # 4351372
Price 374.00
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Online offer:
374.0
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: PTPN22
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001308297.1 NP_001295226.1 15 - 16 2120 150
NM_012411.5 NP_036543.4 14 - 15 2027 150
NM_015967.6 NP_057051.3 16 - 17 2192 150
XM_011541221.1 XP_011539523.1 15 - 16 2095 150
XM_011541222.1 XP_011539524.1 16 - 17 2173 150
XM_011541225.2 XP_011539527.1 15 - 16 2122 150
XM_017001004.1 XP_016856493.1 16 - 17 2173 150
XM_017001005.1 XP_016856494.1 16 - 17 2154 150
GenBank mRNA AF001846.1 - 16 - 17 2100 150
AF077031.1 - 16 - 17 2128 150
AF150732.1 - 16 - 17 2102 150
AK303124.1 - 12 - 13 1827 150
AK310570.1 - 11 - 12 1764 150
AK310698.1 - 16 - 17 2145 150
BC071670.1 - 14 - 15 1966 5497108 150
JN084012.1 - 15 - 16 1997 150

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100015333.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003006.hg.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPN22

Gene Ontology Categories:

Function(s) Process(es)

protein dephosphorylation
autophagy
negative regulation of autophagy
positive regulation of gene expression
negative regulation of gene expression
T cell differentiation
lipopolysaccharide-mediated signaling pathway
positive regulation of type I interferon production
response to lipopolysaccharide
negative regulation of tumor necrosis factor production
regulation of natural killer cell proliferation
positive regulation of toll-like receptor 3 signaling pathway
positive regulation of toll-like receptor 4 signaling pathway
peptidyl-tyrosine dephosphorylation
phosphoanandamide dephosphorylation
negative regulation of JUN kinase activity
regulation of innate immune response
regulation of B cell receptor signaling pathway
negative regulation of T cell receptor signaling pathway
negative regulation of T cell activation
positive regulation of ERK1 and ERK2 cascade
negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway
cellular response to muramyl dipeptide
negative regulation of interleukin-6 secretion
regulation of NIK/NF-kappaB signaling
positive regulation of protein K63-linked ubiquitination
positive regulation of interferon-gamma secretion
negative regulation of p38MAPK cascade
negative regulation of interleukin-8 secretion
protein tyrosine phosphatase activity
protein binding
phosphatase activity
SH3 domain binding
kinase binding
ubiquitin protein ligase binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR01046752.hg.1 ENST00000359785.5 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR01046752.hg.1 ENST00000420377.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR01046752.hg.1 ENST00000525799.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR01046752.hg.1 ENST00000528414.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR01046752.hg.1 ENST00000538253.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR01046752.hg.1 NM_001193431.2 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR01046752.hg.1 NM_012411.5 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR01046752.hg.1 NM_015967.6 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR01046752.hg.1 TC01003006.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000359785.9 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000420377.6 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000525799.1 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000528414.5 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000532224.5 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000538253.5 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 NM_001193431.2 Refseq
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 NM_001308297.1 Refseq
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 NM_012411.5 Refseq
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 NM_015967.6 Refseq
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000359785.9 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000420377.6 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000525799.1 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000528414.5 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000532224.5 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 ENST00000538253.5 Ensembl
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 NM_001193431.2 Refseq
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 NM_001308297.1 Refseq
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 NM_012411.5 Refseq
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 NM_015967.6 Refseq
Affymetrix Human Clariom D Assay PSR0100214408.hg.1 TC0100015333.hg.1 Clariom D TC

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