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See other PTPRB GE Assays ›
Gene Symbol:
PTPRB
Gene Name:
protein tyrosine phosphatase, receptor type B
Gene Aliases:
HPTP-BETA, HPTPB, PTPB, R-PTP-BETA, VEPTP
Chromosome Location:
Chr.12: 70516850 - 70637440 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01549048_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: PTPRB
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001109754.2 NP_001103224.1 32 - 33 6546 84
NM_001206971.1 NP_001193900.1 29 - 30 5607 84
NM_001206972.1 NP_001193901.1 29 - 30 5607 84
NM_002837.4 NP_002828.3 30 - 31 5877 84
XM_006719528.1 XP_006719591.1 32 - 33 6546 84
XM_006719529.3 XP_006719592.1 30 - 31 6373 84
XM_011538614.1 XP_011536916.1 31 - 32 6282 84
XM_017019723.1 XP_016875212.1 31 - 32 6282 84
XM_017019724.1 XP_016875213.1 24 - 25 4321 84
GenBank mRNA BC101679.1 - 30 - 31 5876 8069185 84
BC113463.1 - 30 - 31 5876 8322515 84
BC143356.1 - 29 - 30 5606 9051861 84
BC143360.1 - 29 - 30 5606 9051865 84
BE042873.1 - 2 - 3 84
BX648245.1 - 32 - 33 6529 84
BX648771.1 - 29 - 30 5725 84
CR749546.1 - 31 - 32 6262 84
X54131.1 - 30 - 31 5877 84

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200011245.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12001718.hg.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Protein Phosphatase 3' Most Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPRB

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Function(s) Process(es)

angiogenesis
protein dephosphorylation
phosphate-containing compound metabolic process
dephosphorylation
peptidyl-tyrosine dephosphorylation
transmembrane receptor protein tyrosine phosphatase activity
protein binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 ENST00000261266.5 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 ENST00000334414.6 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 ENST00000451516.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 ENST00000538708.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 ENST00000544694.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 ENST00000550358.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 ENST00000550857.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 NM_001109754.3 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 NM_001206971.2 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 NM_001206972.2 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 NM_002837.5 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR12022803.hg.1 TC12001718.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000261266.9 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000334414.10 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000451516.6 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000538708.5 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000550358.5 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000550857.5 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 NM_001109754.3 Refseq
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 NM_001206971.2 Refseq
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 NM_001206972.2 Refseq
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 NM_002837.5 Refseq
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000261266.9 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000334414.10 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000451516.6 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000538708.5 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000550358.5 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 ENST00000550857.5 Ensembl
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 NM_001109754.3 Refseq
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 NM_001206971.2 Refseq
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 NM_001206972.2 Refseq
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 NM_002837.5 Refseq
Affymetrix Human Clariom D Assay PSR1200187102.hg.1 TC1200011245.hg.1 Clariom D TC

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