Assay Details

Gene Symbol: MSL3P1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_024322.1		1 - 2	86		160
GenBank mRNA	AK301707.1	-	1 - 2	70		160
	AK316372.1	-	1 - 2	37		160
	BI831020.1	-	1 - 2	56		161
	DB457661.1	-	1 - 2	86		160
	DC394932.1	-	1 - 2	37		160

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BM172440.1	-	1 - 2	59	Chr. 2 - 233866712 - 233868381 [-] on Build GRCh38	160
GenBankmRNA	DC313963.1	-	1 - 2	63	Chr. 2 - 233866839 - 233868386 [-] on Build GRCh38	160
GenBankmRNA	HY045557.1	-	1 - 2	50	Chr. 2 - 233866907 - 233868371 [-] on Build GRCh38	160
GenBankmRNA	CN265794.1	-	1 - 2	59	Chr. 2 - 233866719 - 233868368 [-] on Build GRCh38	161
GenBankmRNA	BJ991754.1	-	1 - 2	77	Chr. 2 - 233866946 - 233868400 [-] on Build GRCh38	160
GenBankmRNA	DC395563.1	-	1 - 2	45	Chr. 2 - 233866838 - 233868368 [-] on Build GRCh38	160
GenBankmRNA	DW431108.1	-	1 - 2	63	Chr. 2 - 233867141 - 233868371 [-] on Build GRCh38	160
GenBankmRNA	HY037536.1	-	1 - 2	86	Chr. 2 - 233866957 - 233868409 [-] on Build GRCh38	160
GenBankmRNA	DB447360.1	-	1 - 2	61	Chr. 2 - 233866970 - 233868384 [-] on Build GRCh38	160
GenBankmRNA	DC387411.1	-	1 - 2	35	Chr. 2 - 233866835 - 233868358 [-] on Build GRCh38	160
GenBankmRNA	BG772991.1	-	1 - 2	68	Chr. 2 - 233866633 - 233868388 [-] on Build GRCh38	160
GenBankmRNA	CB993239.1	-	1 - 2	73	Chr. 2 - 233866624 - 233868373 [-] on Build GRCh38	160
GenBankmRNA	DC413728.1	-	1 - 2	35	Chr. 2 - 233867110 - 233868358 [-] on Build GRCh38	160
GenBankmRNA	DC366363.1	-	1 - 2	35	Chr. 2 - 233866828 - 233868358 [-] on Build GRCh38	160
GenBankmRNA	DC397028.1	-	1 - 2	70	Chr. 2 - 233866850 - 233868393 [-] on Build GRCh38	160
GenBankmRNA	HY017356.1	-	1 - 2	66	Chr. 2 - 233866927 - 233868389 [-] on Build GRCh38	160
GenBankmRNA	HY024987.1	-	1 - 2	66	Chr. 2 - 233866923 - 233868389 [-] on Build GRCh38	160
GenBankmRNA	DB442146.1	-	1 - 2	49	Chr. 2 - 233866960 - 233868371 [-] on Build GRCh38	160
GenBankmRNA	BG718481.1	-		50	Chr. - - [-] on Build	164
GenBankmRNA	BF031317.1	-		57	Chr. - - [-] on Build	160
GenBankmRNA	HY030747.1	-	1 - 2	61	Chr. 2 - 233866965 - 233868384 [-] on Build GRCh38	160
GenBankmRNA	BQ108692.1	-	1 - 2	35	Chr. 2 - 233866831 - 233868358 [-] on Build GRCh38	161
GenBankmRNA	DC394654.1	-	1 - 2	70	Chr. 2 - 233866863 - 233868393 [-] on Build GRCh38	160
GenBankmRNA	DB445818.1	-	1 - 2	43	Chr. 2 - 233866987 - 233868366 [-] on Build GRCh38	160
GenBankmRNA	DW436708.1	-	1 - 2	64	Chr. 2 - 233867183 - 233868371 [-] on Build GRCh38	160
GenBankmRNA	BM835808.1	-	1 - 2	56	Chr. 2 - 233866830 - 233868379 [-] on Build GRCh38	160
GenBankmRNA	BG481237.1	-	1 - 2	33	Chr. 2 - 233866721 - 233868356 [-] on Build GRCh38	160
GenBankmRNA	HY008560.1	-	1 - 2	61	Chr. 2 - 233866940 - 233868384 [-] on Build GRCh38	160
GenBankmRNA	DN914754.1	-	1 - 2	46	Chr. 2 - 233866717 - 233868369 [-] on Build GRCh38	160

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	Holliday junction recognition protein	HJURP	FAKTS, URLC9, hFLEG1	-12.3kb	Sense	Chr. 2 - 233836701 - 233854566 on NCBI Build GRCh38
Downstream	transient receptor potential cation channel subfamily M member 8	TRPM8	LTRPC6, TRPP8	49.0kb	Anti-sense	Chr. 2 - 233917342 - 234019522 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200016100.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02002887.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK301707.1,AK316372.1 transcripts.

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Homo sapiens

1700

Probe spans exons

Gene Ontology Categories:

Function(s)

MicroArray Probes:

Agilent Affymetrix ArrayStar ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	291507	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_32_P235159	-	-
Agilent Whole Human Genome Microarray 4x44K G4112F	A_32_P235159	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969087	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969161	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15394794	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969092	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969167	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969129	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969142	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969090	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969152	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969067	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969158	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969137	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969071	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969085	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969074	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969082	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969133	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969163	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969079	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969122	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969140	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15394796	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969127	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969134	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969154	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969061	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969139	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969077	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969132	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969065	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969155	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969068	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969150	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969063	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969146	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969128	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969131	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969116	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969075	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969124	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01969120	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	8059853	-	-
Affymetrix Human Gene 1.1 ST Array	8059852	-	-
Affymetrix Human Genome U219 Array	11753965_PM_at	-	-
Affymetrix Human Genome U219 Array	11753965_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR02046468.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02046468.hg.1	NR_024322.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02046468.hg.1	TC02002887.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02046466.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02046466.hg.1	NR_024322.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02046466.hg.1	TC02002887.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	ENST00000440028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	ENST00000440028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	ENST00000440028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	ENST00000623215.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	ENST00000623215.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	NR_024322.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	NR_024322.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	NR_024322.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200016100.hg.1	NR_024322.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02046465.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02046465.hg.1	NR_024322.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02046465.hg.1	TC02002887.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0200218265.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218265.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200218265.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218265.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200218265.hg.1	TC0200016100.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200218266.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218266.hg.1	ENST00000623215.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218266.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200218266.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218266.hg.1	ENST00000623215.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218266.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200218266.hg.1	TC0200016100.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200218267.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218267.hg.1	ENST00000440028.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218267.hg.1	ENST00000623215.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218267.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200218267.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218267.hg.1	ENST00000440028.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218267.hg.1	ENST00000623215.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218267.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200218267.hg.1	TC0200016100.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200218271.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218271.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200218271.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218271.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200218271.hg.1	TC0200016100.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	ENST00000438684.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	ENST00000440028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	ENST00000440028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	ENST00000440028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	ENST00000623215.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	ENST00000623215.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	NR_024322.1	Refseq
Affymetrix Human Clariom D Assay	TC0200016100.hg.1	NR_024322.1	Refseq

Array Name	Probe IDs	Targets	Target Type
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1678526	CR623684.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1678526	DB457661.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1678526	DC394932.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1678526	NR_024322.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1678526	AK301707.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1678526	CR623684.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1678526	DB457661.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1678526	DC394932.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1678526	NR_024322.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1678526	AK301707.1	human_transcriptome

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Catalog #	4426961
Price	373.00
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Genomic Map