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See other PTPRM GE Assays ›
Gene Symbol:
PTPRM
Gene Name:
protein tyrosine phosphatase, receptor type M
Gene Aliases:
PTPRL1, R-PTP-MU, RPTPM, RPTPU, hR-PTPu
Chromosome Location:
Chr.18: 7567316 - 8406861 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01124528_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: PTPRM
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001105244.1 NP_001098714.1 13 - 14 2664 92
NM_002845.3 NP_002836.3 13 - 14 2664 92
XM_011525712.2 XP_011524014.1 13 - 14 2659 92
XM_011525716.2 XP_011524018.1 9 - 10 1618 92
XM_011525722.2 XP_011524024.1 9 - 10 1624 92
XM_017025899.1 XP_016881388.1 13 - 14 2203 92
XM_017025901.1 XP_016881390.1 13 - 14 2203 92
XM_017025902.1 XP_016881391.1 13 - 14 2203 92
XM_017025903.1 XP_016881392.1 13 - 14 2203 92
XM_017025904.1 XP_016881393.1 13 - 14 2203 92
XM_017025907.1 XP_016881396.1 9 - 10 1624 92
XM_017025909.1 XP_016881398.1 9 - 10 1624 92
GenBank mRNA AK294492.1 - 9 - 10 1545 92
AK303652.1 - 13 - 14 2162 92
BC051651.1 - 13 - 14 2400 5274244 92
BC151842.1 - 13 - 14 3210 8860327 92
X58288.1 - 13 - 14 2161 92

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1800006589.hg.1
This assay targets the same location as HTA transcript cluster(s) TC18000035.hg.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPRM

Panther Classification:

Molecular Function -

extracellular matrix glycoprotein

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of endothelial cell proliferation
protein dephosphorylation
homophilic cell adhesion via plasma membrane adhesion molecules
signal transduction
negative regulation of endothelial cell migration
retina layer formation
negative regulation of angiogenesis
neuron projection development
retinal ganglion cell axon guidance
peptidyl-tyrosine dephosphorylation
response to drug
positive regulation of vasodilation
protein tyrosine phosphatase activity
transmembrane receptor protein tyrosine phosphatase activity
protein binding
identical protein binding
cadherin binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR18000333.hg.1 ENST00000332175.7 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR18000333.hg.1 ENST00000400053.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR18000333.hg.1 ENST00000400060.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR18000333.hg.1 ENST00000444013.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR18000333.hg.1 NM_001105244.1 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR18000333.hg.1 NM_002845.3 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR18000333.hg.1 TC18000035.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000332175.12 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000400053.8 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000400060.8 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000577468.2 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000577827.5 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000580170.5 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000583289.5 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 NM_001105244.1 Refseq
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 NM_002845.3 Refseq
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000332175.12 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000400053.8 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000400060.8 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000577468.2 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000577827.5 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000580170.5 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 ENST00000583289.5 Ensembl
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 NM_001105244.1 Refseq
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 NM_002845.3 Refseq
Affymetrix Human Clariom D Assay PSR1800145096.hg.1 TC1800006589.hg.1 Clariom D TC

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