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See other CPSF1 GE Assays ›
Gene Symbol:
CPSF1
Gene Name:
cleavage and polyadenylation specific factor 1
Gene Aliases:
CPSF160, HSU37012, P/cl.18
Chromosome Location:
Chr.8: 144393231 - 144409400 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01121774_g1
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Availability Made To Order
Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: CPSF1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_013291.2 NP_037423.2 3 - 4 246 78
XM_006716548.2 XP_006716611.1 3 - 4 297 78
GenBank mRNA AK293601.1 - 2 - 3 204 78
BC017232.2 - 3 - 4 216 4300196 78
CD299980.1 - 3 - 4 246 78
U37012.1 - 3 - 4 222 78

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800012211.hg.1
This assay targets the same location as HTA transcript cluster(s) TC08001748.hg.1

Set Membership:

Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CPSF1

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Function(s) Process(es)

mRNA splicing, via spliceosome
termination of RNA polymerase II transcription
mRNA polyadenylation
mRNA cleavage
tRNA splicing, via endonucleolytic cleavage and ligation
mRNA export from nucleus
mRNA 3'-end processing
pre-mRNA cleavage required for polyadenylation
protein binding
enzyme binding
mRNA 3'-UTR AU-rich region binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR08023205.hg.1 ENST00000349769.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR08023205.hg.1 NM_013291.2 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR08023205.hg.1 TC08001748.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 ENST00000531042.5 Ensembl
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 ENST00000616140.1 Ensembl
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 ENST00000620219.4 Ensembl
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 ENST00000622776.1 Ensembl
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 NM_013291.2 Refseq
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 ENST00000531042.5 Ensembl
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 ENST00000616140.1 Ensembl
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 ENST00000620219.4 Ensembl
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 ENST00000622776.1 Ensembl
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 NM_013291.2 Refseq
Affymetrix Human Clariom D Assay PSR0800183691.hg.1 TC0800012211.hg.1 Clariom D TC

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