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See other SDC4 GE Assays ›
Gene Symbol:
SDC4
Gene Name:
syndecan 4
Gene Aliases:
SYND4
Chromosome Location:
Chr.20: 45325288 - 45348424 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01120908_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: SDC4
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_002999.3 NP_002990.2 3 - 4 285 147
XM_011528977.2 XP_011527279.1 2 - 3 140 147
GenBank mRNA AK222695.1 - 3 - 4 285 147
AK223243.1 - 3 - 4 287 147
AK303964.1 - 2 - 3 146 147
AK312507.1 - 3 - 4 285 147
BC030805.1 - 3 - 4 285 4690309 147
CR542045.1 - 3 - 4 245 147
CR542074.1 - 3 - 4 245 147
D13292.1 - 3 - 4 285 147
X67016.1 - 3 - 4 271 147

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000009218.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000878.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK303964.1, XM_011528977.2 transcripts.

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Homo sapiens Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SDC4

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Function(s) Process(es)

retinoid metabolic process
ureteric bud development
neural tube closure
glycosaminoglycan biosynthetic process
glycosaminoglycan catabolic process
signal transduction
regulation of fibroblast migration
cell migration
glycosaminoglycan metabolic process
wound healing
positive regulation of protein kinase activity
positive regulation of stress fiber assembly
positive regulation of focal adhesion assembly
inner ear receptor stereocilium organization
positive regulation of exosomal secretion
positive regulation of extracellular exosome assembly
fibronectin binding
protein kinase C binding
protein binding
thrombospondin receptor activity

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR20011983.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR20011983.hg.1 ENST00000537976.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR20011983.hg.1 NM_002999.3 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR20011983.hg.1 TC20000878.hg.1 HTA TC
Affymetrix Human Transcriptome Array 2.0 PSR20011982.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR20011982.hg.1 ENST00000537976.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR20011982.hg.1 NM_002999.3 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR20011982.hg.1 TC20000878.hg.1 HTA TC
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Transcriptome Array 2.0 TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay PSR2000164491.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay PSR2000164491.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay PSR2000164491.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay PSR2000164491.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay PSR2000164491.hg.1 TC2000009218.hg.1 Clariom D TC
Affymetrix Human Clariom D Assay PSR2000164492.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay PSR2000164492.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay PSR2000164492.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay PSR2000164492.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay PSR2000164492.hg.1 TC2000009218.hg.1 Clariom D TC
Affymetrix Human Clariom D Assay TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay TC2000009218.hg.1 ENST00000372733.3 Ensembl
Affymetrix Human Clariom D Assay TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay TC2000009218.hg.1 NM_002999.3 Refseq
Affymetrix Human Clariom D Assay TC2000009218.hg.1 NM_002999.3 Refseq

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Host server : magellan-search-77574795ff-5hfml:80/100.66.128.142:80.
git-commit: 5cc8a939e1477954742eeb281a87e54f28adfb77
git-url: https://github.com/thermofisher/magellan-search
git-branch: release/search_redesign_header