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See other PTPN13 GE Assays ›
Gene Symbol:
PTPN13
Gene Name:
protein tyrosine phosphatase, non-receptor type 13
Gene Aliases:
FAP-1, PNP1, PTP-BAS, PTP-BL, PTP1E, PTPL1, PTPLE, hPTP1E
Chromosome Location:
Chr.4: 86594307 - 86815179 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01106214_m1
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Catalog # 4331182
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: PTPN13
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_006264.2 NP_006255.1 29 - 30 5221 65
NM_080683.2 NP_542414.1 30 - 31 5278 65
NM_080684.2 NP_542415.1 27 - 28 4705 65
NM_080685.2 NP_542416.1 30 - 31 5293 65
XM_011532165.1 XP_011530467.1 30 - 31 5301 65
XM_017008511.1 XP_016864000.1 30 - 31 5286 65
XM_017008512.1 XP_016864001.1 29 - 30 5244 65
XM_017008513.1 XP_016864002.1 29 - 30 5229 65
XM_017008514.1 XP_016864003.1 29 - 30 5244 65
XM_017008515.1 XP_016864004.1 29 - 30 4740 65
XM_017008516.1 XP_016864005.1 27 - 28 4728 65
GenBank mRNA AB208904.1 - 28 - 29 4645 65
AF233323.1 - 7 - 8 832 65
BC039610.1 - 7 - 8 832 65
BC140777.1 - 28 - 29 4760 9021645 65
D21209.1 - 30 - 31 4861 65
D21210.1 - 29 - 30 4804 65
D21211.1 - 27 - 28 4288 65
L34583.1 - 7 - 8 979 65
U12128.1 - 29 - 30 5030 65
X79676.1 - 7 - 8 1151 65
X80289.1 - 29 - 30 4818 65

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0400008041.hg.1
This assay targets the same location as HTA transcript cluster(s) TC04000469.hg.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Protein Phosphatase Mammalian Gene Collection Recommended Assay Homo sapiens 1700 Inventoried Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPN13

Panther Classification:

Molecular Function -

protein phosphatase

Gene Ontology Categories:

Function(s) Process(es)

protein dephosphorylation
regulation of phosphatidylinositol 3-kinase signaling
peptidyl-tyrosine dephosphorylation
protein tyrosine phosphatase activity
protein binding
phosphatidylinositol 3-kinase regulatory subunit binding

MicroArray Probes:

Affymetrix ABI

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 ENST00000316707.6 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 ENST00000357349.4 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 ENST00000411767.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 ENST00000427191.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 ENST00000436978.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 ENST00000511467.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 NM_006264.2 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 NM_080683.2 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 NM_080684.2 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 NM_080685.2 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR04006753.hg.1 TC04000469.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 ENST00000316707.10 Ensembl
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 ENST00000411767.6 Ensembl
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 ENST00000427191.6 Ensembl
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 ENST00000436978.5 Ensembl
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 ENST00000511467.1 Ensembl
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 NM_006264.2 Refseq
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 NM_080683.2 Refseq
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 NM_080684.2 Refseq
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 NM_080685.2 Refseq
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 ENST00000316707.10 Ensembl
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 ENST00000411767.6 Ensembl
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 ENST00000427191.6 Ensembl
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 ENST00000436978.5 Ensembl
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 ENST00000511467.1 Ensembl
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 NM_006264.2 Refseq
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 NM_080683.2 Refseq
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 NM_080684.2 Refseq
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 NM_080685.2 Refseq
Affymetrix Human Clariom D Assay PSR0400155353.hg.1 TC0400008041.hg.1 Clariom D TC
Array Name Probe IDs Targets Target Type
ABI Human Genome Survey Microarray Version 2.0 188871 - -

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