Assay Details

Gene Symbol: SLC6A1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_003042.3	NP_003033.3	12 - 13	1730		81
	XM_005265410.4	XP_005265467.1	12 - 13	3087		81
	XM_005265411.4	XP_005265468.1	12 - 13	3026		81
	XM_006713306.3	XP_006713369.1	12 - 13	1685		81
	XM_011534025.2	XP_011532327.1	12 - 13	3777		81
	XM_011534027.2	XP_011532329.1	12 - 13	3716		81
	XM_017007071.1	XP_016862560.1	13 - 14	3509		81
	XM_017007072.1	XP_016862561.1	13 - 14	2819		81
GenBank mRNA	AK295702.1	-	9 - 10	1093		81
	BC033904.1	-	12 - 13	1698	5264672	81
	BC057291.1	-	12 - 13	1710		81
	X54673.1	-	11 - 12	1553		81

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300006599.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000063.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

Transporter

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SLC6A1

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000460480.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000460480.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000460480.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000460480.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000460480.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000495636.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000495636.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000495636.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000495636.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	ENST00000495636.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03001387.hg.1	ENST00000287766.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03001387.hg.1	ENST00000536032.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03001387.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03001387.hg.1	TC03000063.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03001386.hg.1	ENST00000287766.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03001386.hg.1	ENST00000536032.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03001386.hg.1	NM_003042.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03001386.hg.1	TC03000063.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000425938.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000460480.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000460480.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000460480.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000460480.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000460480.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000462473.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000495636.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000495636.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000495636.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000495636.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	ENST00000495636.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	TC0300006599.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300145807.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0300145807.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300145807.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0300145807.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300145807.hg.1	TC0300006599.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300145808.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0300145808.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300145808.hg.1	ENST00000287766.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0300145808.hg.1	NM_003042.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300145808.hg.1	TC0300006599.hg.1	Clariom D TC

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Catalog #	4351372
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System Message

Genomic Map