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See other CPSF3 GE Assays ›
Gene Symbol:
CPSF3
Gene Name:
cleavage and polyadenylation specific factor 3
Gene Aliases:
CPSF-73, CPSF73
Chromosome Location:
Chr.2: 9423537 - 9473110 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01089083_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: CPSF3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001321833.1 NP_001308762.1 16 - 17 2321 132
NM_001321834.1 NP_001308763.1 16 - 17 3229 132
NM_001321835.1 NP_001308764.1 16 - 17 1964 132
NM_001321836.1 NP_001308765.1 17 - 18 2411 132
NM_016207.3 NP_057291.1 16 - 17 2092 132
GenBank mRNA AF171877.1 - 16 - 17 1870 132
AK025440.1 - 14 - 15 1751 132
AK223487.1 - 16 - 17 1890 132
AK298918.1 - 14 - 15 1685 132
BC011654.2 - 16 - 17 1965 4304135 132
BC014106.1 - 16 - 17 2882 132
BC020211.1 - 16 - 17 1890 4890593 132
EF036508.1 - 3 - 4 252 132

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200006647.hg.1

Set Membership:

Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CPSF3

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Function(s) Process(es)

mRNA splicing, via spliceosome
termination of RNA polymerase II transcription
mRNA polyadenylation
mRNA cleavage
mRNA 3'-end processing by stem-loop binding and cleavage
mRNA export from nucleus
mRNA 3'-end processing
RNA phosphodiester bond hydrolysis, endonucleolytic
RNA binding
endoribonuclease activity
protein binding
5'-3' exonuclease activity
metal ion binding

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Clariom D Assay PSR0200145483.hg.1 ENST00000238112.7 Ensembl
Affymetrix Human Clariom D Assay PSR0200145483.hg.1 ENST00000460593.1 Ensembl
Affymetrix Human Clariom D Assay PSR0200145483.hg.1 ENST00000489403.1 Ensembl
Affymetrix Human Clariom D Assay PSR0200145483.hg.1 NM_016207.3 Refseq
Affymetrix Human Clariom D Assay PSR0200145483.hg.1 ENST00000238112.7 Ensembl
Affymetrix Human Clariom D Assay PSR0200145483.hg.1 ENST00000460593.1 Ensembl
Affymetrix Human Clariom D Assay PSR0200145483.hg.1 ENST00000489403.1 Ensembl
Affymetrix Human Clariom D Assay PSR0200145483.hg.1 NM_016207.3 Refseq
Affymetrix Human Clariom D Assay PSR0200145483.hg.1 TC0200006647.hg.1 Clariom D TC

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