Assay Details

Gene Symbol: CHD9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001308319.1	NP_001295248.1	27 - 28	5461		95
	NM_025134.4	NP_079410.4	28 - 29	5506		95
	XM_005256168.3	XP_005256225.1	28 - 29	5548		95
	XM_005256169.2	XP_005256226.1	28 - 29	5570		95
	XM_005256172.3	XP_005256229.1	28 - 29	5487		95
	XM_005256176.3	XP_005256233.1	27 - 28	4155		95
	XM_006721281.2	XP_006721344.1	28 - 29	5487		95
	XM_006721283.3	XP_006721346.1	28 - 29	5708		95
	XM_011523347.2	XP_011521649.1	29 - 30	5620		95
	XM_017023718.1	XP_016879207.1	29 - 30	5743		95
	XM_017023719.1	XP_016879208.1	30 - 31	5694		95
	XM_017023720.1	XP_016879209.1	29 - 30	5588		95
	XM_017023721.1	XP_016879210.1	29 - 30	5744		95
	XM_017023722.1	XP_016879211.1	29 - 30	5744		95
	XM_017023723.1	XP_016879212.1	29 - 30	5744		95
	XM_017023724.1	XP_016879213.1	29 - 30	5570		95
	XM_017023725.1	XP_016879214.1	29 - 30	5570		95
	XM_017023726.1	XP_016879215.1	27 - 28	4777		95
	XM_017023727.1	XP_016879216.1	27 - 28	4155		95
	XM_017023728.1	XP_016879217.1	29 - 30	5604		95
GenBank mRNA	AB002306.3	-	27 - 28	4929		95
	AY243500.1	-	27 - 28	5384		95
	AY243501.1	-	9 - 10	1066		95
	BC140815.1	-	27 - 28	5338	9021683	95
	BC144622.1	-	27 - 28	5338	9053153	95
	DQ059482.1	-	18 - 19	2834		95
	DQ333316.1	-	28 - 29	5600		95

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600007874.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000445.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CHD9

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR16006200.hg.1	ENST00000219084.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16006200.hg.1	ENST00000398510.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16006200.hg.1	ENST00000447540.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16006200.hg.1	ENST00000450543.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16006200.hg.1	NM_025134.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16006200.hg.1	TC16000445.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000219084.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000398510.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000447540.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000564845.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000566029.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000615216.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000622617.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	NM_001308319.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	NM_025134.5	Refseq
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000219084.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000398510.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000447540.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000564845.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000566029.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000615216.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	ENST00000622617.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	NM_001308319.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	NM_025134.5	Refseq
Affymetrix Human Clariom D Assay	PSR1600157434.hg.1	TC1600007874.hg.1	Clariom D TC

Availability	Made To Order
Catalog #	4351372
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System Message

Genomic Map