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See other KDM4A GE Assays ›
Gene Symbol:
KDM4A
Gene Name:
lysine demethylase 4A
Gene Aliases:
JHDM3A, JMJD2, JMJD2A, TDRD14A
Chromosome Location:
Chr.1: 43650118 - 43705518 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01026875_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: KDM4A
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_014663.2 NP_055478.2 16 - 17 2548 60
XM_005271354.3 XP_005271411.1 16 - 17 2585 60
XM_005271355.3 XP_005271412.1 16 - 17 2503 60
XM_005271356.3 XP_005271413.1 17 - 18 2624 60
XM_011542467.2 XP_011540769.2 7 - 8 1656 60
XM_017002912.1 XP_016858401.1 17 - 18 2693 60
GenBank mRNA AB014577.1 - 16 - 17 2507 60
AK294596.1 - 2 - 3 133 60
AK310295.1 - 1 - 2 166 60
BC002558.2 - 16 - 17 2516 3138875 60

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100008073.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000549.hg.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene KDM4A

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)

transcription, DNA-templated
negative regulation of autophagy
negative regulation of gene expression
cardiac muscle hypertrophy in response to stress
viral process
histone demethylation
negative regulation of transcription, DNA-templated
oxidation-reduction process
histone H3-K36 demethylation
negative regulation of histone H3-K9 trimethylation
protein binding
zinc ion binding
ubiquitin protein ligase binding
histone demethylase activity
methylated histone binding
histone demethylase activity (H3-K36 specific)

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR01008888.hg.1 ENST00000372396.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR01008888.hg.1 NM_014663.2 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR01008888.hg.1 TC01000549.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR0100157154.hg.1 ENST00000372396.3 Ensembl
Affymetrix Human Clariom D Assay PSR0100157154.hg.1 NM_014663.2 Refseq
Affymetrix Human Clariom D Assay PSR0100157154.hg.1 ENST00000372396.3 Ensembl
Affymetrix Human Clariom D Assay PSR0100157154.hg.1 NM_014663.2 Refseq
Affymetrix Human Clariom D Assay PSR0100157154.hg.1 TC0100008073.hg.1 Clariom D TC

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