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See other SETD2 GE Assays ›
Gene Symbol:
SETD2
Gene Name:
SET domain containing 2
Gene Aliases:
HBP231, HIF-1, HIP-1, HSPC069, HYPB, KMT3A, LLS, SET2, p231HBP
Chromosome Location:
Chr.3: 47016408 - 47164109 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01015880_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: SETD2
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_014159.6 NP_054878.5 13 - 14 6160 100
XM_011533631.2 XP_011531933.1 14 - 15 7656 100
XM_011533632.2 XP_011531934.1 13 - 14 6232 100
XM_011533633.2 XP_011531935.1 13 - 14 7523 100
XM_011533634.1 XP_011531936.1 13 - 14 6185 100
XM_017006270.1 XP_016861759.1 11 - 12 7359 100
GenBank mRNA AB051519.2 - 11 - 12 4160 100
AJ238403.1 - 11 - 12 5007 100
AY576987.1 - 11 - 12 4669 100
BC090954.1 - 11 - 12 3950 100
BC117162.1 - 11 - 12 4783 40125713 100
BC117164.1 - 11 - 12 4783 40125715 100
BX649110.1 - 11 - 12 5927 100

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300010968.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03001364.hg.1

Set Membership:

Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SETD2

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein histone modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)

angiogenesis
morphogenesis of a branching structure
neural tube closure
mismatch repair
regulation of transcription, DNA-templated
transcription elongation from RNA polymerase II promoter
regulation of mRNA export from nucleus
forebrain development
nucleosome organization
cell migration involved in vasculogenesis
mesoderm morphogenesis
embryonic cranial skeleton morphogenesis
stem cell development
pericardium development
embryonic placenta morphogenesis
coronary vasculature morphogenesis
histone H3-K36 trimethylation
histone H3-K36 dimethylation
protein binding
histone-lysine N-methyltransferase activity
histone methyltransferase activity (H3-K36 specific)

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR03023385.hg.1 ENST00000409792.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023385.hg.1 ENST00000451092.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023385.hg.1 ENST00000543224.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023385.hg.1 NM_014159.6 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR03023385.hg.1 TC03001364.hg.1 HTA TC
Affymetrix Human Transcriptome Array 2.0 PSR03023387.hg.1 ENST00000409792.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023387.hg.1 ENST00000451092.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023387.hg.1 ENST00000492397.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023387.hg.1 ENST00000543224.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023387.hg.1 NM_014159.6 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR03023387.hg.1 TC03001364.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 ENST00000330022.11 Ensembl
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 ENST00000409792.3 Ensembl
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 ENST00000431180.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 ENST00000445387.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 NM_014159.6 Refseq
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 ENST00000330022.11 Ensembl
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 ENST00000409792.3 Ensembl
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 ENST00000431180.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 ENST00000445387.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 NM_014159.6 Refseq
Affymetrix Human Clariom D Assay PSR0300180069.hg.1 TC0300010968.hg.1 Clariom D TC
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 ENST00000330022.11 Ensembl
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 ENST00000409792.3 Ensembl
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 ENST00000431180.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 ENST00000445387.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 ENST00000492397.1 Ensembl
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 NM_014159.6 Refseq
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 ENST00000330022.11 Ensembl
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 ENST00000409792.3 Ensembl
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 ENST00000431180.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 ENST00000445387.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 ENST00000492397.1 Ensembl
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 NM_014159.6 Refseq
Affymetrix Human Clariom D Assay PSR0300180073.hg.1 TC0300010968.hg.1 Clariom D TC

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