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See other SETD2 GE Assays ›
Gene Symbol:
SETD2
Gene Name:
SET domain containing 2
Gene Aliases:
HBP231, HIF-1, HIP-1, HSPC069, HYPB, KMT3A, LLS, SET2, p231HBP
Chromosome Location:
Chr.3: 47016408 - 47164109 on Build GRCh38
Species:
Human
Species Specific ID (Flybase ID):
-
Assay ID Hs01014788_m1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: SETD2
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_014159.6 NP_054878.5 11 - 12 5441 62
XM_011533631.2 XP_011531933.1 12 - 13 6937 62
XM_011533632.2 XP_011531934.1 11 - 12 5513 62
XM_011533633.2 XP_011531935.1 11 - 12 6804 62
XM_011533634.1 XP_011531936.1 11 - 12 5466 62
XM_017006270.1 XP_016861759.1 9 - 10 6640 62
GenBank mRNA AB051519.2 - 9 - 10 3441 62
AF161554.1 - 9 - 10 1185 62
AL831959.1 - 8 - 9 4416 62
AY576987.1 - 9 - 10 3950 62
AY576988.1 - 10 - 11 3953 62
BC090954.1 - 9 - 10 3231 62
BC117162.1 - 9 - 10 4064 40125713 62
BC117164.1 - 9 - 10 4064 40125715 62
BX649110.1 - 9 - 10 5208 62

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300010968.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03001364.hg.1

Set Membership:

Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Homo sapiens Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SETD2

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein histone modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)

angiogenesis
morphogenesis of a branching structure
neural tube closure
mismatch repair
regulation of transcription, DNA-templated
transcription elongation from RNA polymerase II promoter
regulation of mRNA export from nucleus
forebrain development
nucleosome organization
cell migration involved in vasculogenesis
mesoderm morphogenesis
embryonic cranial skeleton morphogenesis
stem cell development
pericardium development
embryonic placenta morphogenesis
coronary vasculature morphogenesis
histone H3-K36 trimethylation
histone H3-K36 dimethylation
protein binding
histone-lysine N-methyltransferase activity
histone methyltransferase activity (H3-K36 specific)

MicroArray Probes:

Affymetrix

Array Name Probe IDs Targets Target Type
Affymetrix Human Transcriptome Array 2.0 PSR03023394.hg.1 ENST00000409792.3 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023394.hg.1 ENST00000451092.2 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023394.hg.1 ENST00000543224.1 Ensembl
Affymetrix Human Transcriptome Array 2.0 PSR03023394.hg.1 NM_014159.6 Refseq
Affymetrix Human Transcriptome Array 2.0 PSR03023394.hg.1 TC03001364.hg.1 HTA TC
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 ENST00000330022.11 Ensembl
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 ENST00000409792.3 Ensembl
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 ENST00000431180.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 ENST00000445387.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 NM_014159.6 Refseq
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 ENST00000330022.11 Ensembl
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 ENST00000409792.3 Ensembl
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 ENST00000431180.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 ENST00000445387.5 Ensembl
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 NM_014159.6 Refseq
Affymetrix Human Clariom D Assay PSR0300180081.hg.1 TC0300010968.hg.1 Clariom D TC

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